Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

RNU6-1 (RNA, U6 small nuclear 1)

Identity

Alias_namesRNU6A
RNA
Alias_symbol (synonym)U6
U6-1
Other aliasRNU6
HGNC (Hugo) RNU6-1
LocusID (NCBI) 26827
Atlas_Id 55173
Location 10p13  [Link to chromosome band 10p13]
Location_base_pair Starts at 13217269 and ends at 13217374 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RNU6-1   10227
Cards
Entrez_Gene (NCBI)RNU6-1  26827  RNA, U6 small nuclear 1
AliasesRNU6; RNU6A; U6; U6-1
GeneCards (Weizmann)RNU6-1
Ensembl hg19 (Hinxton)ENSG00000206625 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000206625 [Gene_View]  chr10:13217269-13217374 [Contig_View]  RNU6-1 [Vega]
ICGC DataPortalENSG00000206625
TCGA cBioPortalRNU6-1
AceView (NCBI)RNU6-1
Genatlas (Paris)RNU6-1
WikiGenes26827
SOURCE (Princeton)RNU6-1
Genetics Home Reference (NIH)RNU6-1
Genomic and cartography
GoldenPath hg38 (UCSC)RNU6-1  -     chr10:13217269-13217374 +  10p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNU6-1  -     10p13   [Description]    (hg19-Feb_2009)
EnsemblRNU6-1 - 10p13 [CytoView hg19]  RNU6-1 - 10p13 [CytoView hg38]
Mapping of homologs : NCBIRNU6-1 [Mapview hg19]  RNU6-1 [Mapview hg38]
OMIM180692   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNU6-1
Alternative Splicing GalleryENSG00000206625
Gene ExpressionRNU6-1 [ NCBI-GEO ]   RNU6-1 [ EBI - ARRAY_EXPRESS ]   RNU6-1 [ SEEK ]   RNU6-1 [ MEM ]
Gene Expression Viewer (FireBrowse)RNU6-1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)26827
GTEX Portal (Tissue expression)RNU6-1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNU6-1
DMDM Disease mutations26827
Blocks (Seattle)RNU6-1
Human Protein AtlasENSG00000206625
Protein Interaction databases
FunCoupENSG00000206625
BioGRIDRNU6-1
STRING (EMBL)RNU6-1
ZODIACRNU6-1
Ontologies - Pathways
Huge Navigator RNU6-1 [HugePedia]
snp3D : Map Gene to Disease26827
BioCentury BCIQRNU6-1
ClinGenRNU6-1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26827
Chemical/Pharm GKB GenePA162401977
Clinical trialRNU6-1
Miscellaneous
canSAR (ICR)RNU6-1 (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNU6-1
EVEXRNU6-1
GoPubMedRNU6-1
iHOPRNU6-1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 25 19:29:14 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.