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RNVU1-18 (RNA, variant U1 small nuclear 18)

Identity

Alias_namesRNU1P1
RNU1-5
RNU1-25
RNU1-25P
RNA, U1 small nuclear pseudogene 1
RNA, U1 small nuclear 5
RNA, U1 small nuclear 25
RNA, U1 small nuclear 25, pseudogene
Alias_symbol (synonym)vU1.18
U1P101
U1P15
U1.15
Other aliasRNU1P9
HGNC (Hugo) RNVU1-18
LocusID (NCBI) 26863
Atlas_Id 78978
Location 1q21.1  [Link to chromosome band 1q21]
Location_base_pair Starts at 143729407 and ends at 143729570 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RNVU1-18   37496
Cards
Entrez_Gene (NCBI)RNVU1-18  26863  RNA, variant U1 small nuclear 18
AliasesRNU1-25; RNU1-25P; RNU1-5; RNU1P1; 
RNU1P9; U1.15; U1P101; U1P15; vU1.18
GeneCards (Weizmann)RNVU1-18
Ensembl hg19 (Hinxton)ENSG00000206737 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000206737 [Gene_View]  chr1:143729407-143729570 [Contig_View]  RNVU1-18 [Vega]
ICGC DataPortalENSG00000206737
TCGA cBioPortalRNVU1-18
AceView (NCBI)RNVU1-18
Genatlas (Paris)RNVU1-18
WikiGenes26863
SOURCE (Princeton)RNVU1-18
Genetics Home Reference (NIH)RNVU1-18
Genomic and cartography
GoldenPath hg38 (UCSC)RNVU1-18  -     chr1:143729407-143729570 -  1q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RNVU1-18  -     1q21.1   [Description]    (hg19-Feb_2009)
EnsemblRNVU1-18 - 1q21.1 [CytoView hg19]  RNVU1-18 - 1q21.1 [CytoView hg38]
Mapping of homologs : NCBIRNVU1-18 [Mapview hg19]  RNVU1-18 [Mapview hg38]
Gene and transcription
Genbank (Entrez)JQ988812
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RNVU1-18
Alternative Splicing GalleryENSG00000206737
Gene ExpressionRNVU1-18 [ NCBI-GEO ]   RNVU1-18 [ EBI - ARRAY_EXPRESS ]   RNVU1-18 [ SEEK ]   RNVU1-18 [ MEM ]
Gene Expression Viewer (FireBrowse)RNVU1-18 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)26863
GTEX Portal (Tissue expression)RNVU1-18
Human Protein AtlasENSG00000206737-RNVU1-18 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RNVU1-18
DMDM Disease mutations26863
Blocks (Seattle)RNVU1-18
Human Protein Atlas [tissue]ENSG00000206737-RNVU1-18 [tissue]
Protein Interaction databases
FunCoupENSG00000206737
BioGRIDRNVU1-18
STRING (EMBL)RNVU1-18
ZODIACRNVU1-18
Ontologies - Pathways
Huge Navigator RNVU1-18 [HugePedia]
snp3D : Map Gene to Disease26863
BioCentury BCIQRNVU1-18
ClinGenRNVU1-18
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26863
Chemical/Pharm GKB GenePA34496
Clinical trialRNVU1-18
Miscellaneous
canSAR (ICR)RNVU1-18 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRNVU1-18
EVEXRNVU1-18
GoPubMedRNVU1-18
iHOPRNVU1-18
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:02:41 CET 2017

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