Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ROPN1L-AS1 (ROPN1L antisense RNA 1)

Identity

Alias_namesROPN1L antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) ROPN1L-AS1
LocusID (NCBI) 100505845
Atlas_Id 72766
Location 5p15.2  [Link to chromosome band 5p15]
Location_base_pair Starts at 10440847 and ends at 10441963 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ROPN1L-AS1   39984
Cards
Entrez_Gene (NCBI)ROPN1L-AS1  100505845  ROPN1L antisense RNA 1
Aliases
GeneCards (Weizmann)ROPN1L-AS1
Ensembl hg19 (Hinxton) [Gene_View]  chr5:10440847-10441963 [Contig_View]  ROPN1L-AS1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:10440847-10441963 [Contig_View]  ROPN1L-AS1 [Vega]
TCGA cBioPortalROPN1L-AS1
AceView (NCBI)ROPN1L-AS1
Genatlas (Paris)ROPN1L-AS1
WikiGenes100505845
SOURCE (Princeton)ROPN1L-AS1
Genetics Home Reference (NIH)ROPN1L-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)ROPN1L-AS1  -     chr5:10440847-10441963 -  5p15.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)ROPN1L-AS1  -     5p15.2   [Description]    (hg38-Dec_2013)
EnsemblROPN1L-AS1 - 5p15.2 [CytoView hg19]  ROPN1L-AS1 - 5p15.2 [CytoView hg38]
Mapping of homologs : NCBIROPN1L-AS1 [Mapview hg19]  ROPN1L-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA393211 BG197480 HG497764 HY043091 HY045761
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_006576 NW_004929321
Consensus coding sequences : CCDS (NCBI)ROPN1L-AS1
Cluster EST : UnigeneHs.599395 [ NCBI ]
CGAP (NCI)Hs.599395
Gene ExpressionROPN1L-AS1 [ NCBI-GEO ]   ROPN1L-AS1 [ EBI - ARRAY_EXPRESS ]   ROPN1L-AS1 [ SEEK ]   ROPN1L-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ROPN1L-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100505845
GTEX Portal (Tissue expression)ROPN1L-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ROPN1L-AS1
DMDM Disease mutations100505845
Blocks (Seattle)ROPN1L-AS1
Protein Interaction databases
BioGRIDROPN1L-AS1
STRING (EMBL)ROPN1L-AS1
ZODIACROPN1L-AS1
Ontologies - Pathways
Huge Navigator ROPN1L-AS1 [HugePedia]
snp3D : Map Gene to Disease100505845
BioCentury BCIQROPN1L-AS1
ClinGenROPN1L-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505845
Clinical trialROPN1L-AS1
Miscellaneous
canSAR (ICR)ROPN1L-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineROPN1L-AS1
EVEXROPN1L-AS1
GoPubMedROPN1L-AS1
iHOPROPN1L-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:41:32 CET 2017

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