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ROR1-AS1 (ROR1 antisense RNA 1)

Identity

Alias (NCBI)-
HGNC (Hugo) ROR1-AS1
LocusID (NCBI) 101927034
Atlas_Id 72767
Location 1p31.3  [Link to chromosome band 1p31]
Location_base_pair Starts at 64094442 and ends at 64112205 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)ROR1-AS1   40508
Cards
Entrez_Gene (NCBI)ROR1-AS1    ROR1 antisense RNA 1
Aliases
GeneCards (Weizmann)ROR1-AS1
Ensembl hg19 (Hinxton)ENSG00000223949 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000223949 [Gene_View]  ENSG00000223949 [Sequence]  chr1:64094442-64112205 [Contig_View]  ROR1-AS1 [Vega]
ICGC DataPortalENSG00000223949
TCGA cBioPortalROR1-AS1
AceView (NCBI)ROR1-AS1
Genatlas (Paris)ROR1-AS1
SOURCE (Princeton)ROR1-AS1
Genetics Home Reference (NIH)ROR1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ROR1-AS1  -     chr1:64094442-64112205 -  1p31.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ROR1-AS1  -     1p31.3   [Description]    (hg19-Feb_2009)
GoldenPathROR1-AS1 - 1p31.3 [CytoView hg19]  ROR1-AS1 - 1p31.3 [CytoView hg38]
ImmunoBaseENSG00000223949
genome Data Viewer NCBIROR1-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK096291 BC040909
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ROR1-AS1
Alternative Splicing GalleryENSG00000223949
Gene ExpressionROR1-AS1 [ NCBI-GEO ]   ROR1-AS1 [ EBI - ARRAY_EXPRESS ]   ROR1-AS1 [ SEEK ]   ROR1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ROR1-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of ROR1-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101927034
GTEX Portal (Tissue expression)ROR1-AS1
Human Protein AtlasENSG00000223949-ROR1-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ROR1-AS1
Blocks (Seattle)ROR1-AS1
Human Protein Atlas [tissue]ENSG00000223949-ROR1-AS1 [tissue]
Protein Interaction databases
BioGRIDROR1-AS1
STRING (EMBL)ROR1-AS1
ZODIACROR1-AS1
Ontologies - Pathways
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineROR1-AS1
EVEXROR1-AS1
GoPubMedROR1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Sat Dec 5 17:25:19 CET 2020

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