Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ROR1-AS1 (ROR1 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) ROR1-AS1
LocusID (NCBI) 101927034
Atlas_Id 72767
Location 1p31.3  [Link to chromosome band 1p31]
Location_base_pair Starts at 64105323 and ends at 64113791 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ROR1-AS1   40508
Cards
Entrez_Gene (NCBI)ROR1-AS1  101927034  ROR1 antisense RNA 1
Aliases
GeneCards (Weizmann)ROR1-AS1
Ensembl hg19 (Hinxton)ENSG00000223949 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000223949 [Gene_View]  chr1:64105323-64113791 [Contig_View]  ROR1-AS1 [Vega]
ICGC DataPortalENSG00000223949
TCGA cBioPortalROR1-AS1
AceView (NCBI)ROR1-AS1
Genatlas (Paris)ROR1-AS1
WikiGenes101927034
SOURCE (Princeton)ROR1-AS1
Genetics Home Reference (NIH)ROR1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ROR1-AS1  -     chr1:64105323-64113791 -  1p31.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ROR1-AS1  -     1p31.3   [Description]    (hg19-Feb_2009)
EnsemblROR1-AS1 - 1p31.3 [CytoView hg19]  ROR1-AS1 - 1p31.3 [CytoView hg38]
Mapping of homologs : NCBIROR1-AS1 [Mapview hg19]  ROR1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK096291 BC040909
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ROR1-AS1
Cluster EST : UnigeneHs.680824 [ NCBI ]
CGAP (NCI)Hs.680824
Alternative Splicing GalleryENSG00000223949
Gene ExpressionROR1-AS1 [ NCBI-GEO ]   ROR1-AS1 [ EBI - ARRAY_EXPRESS ]   ROR1-AS1 [ SEEK ]   ROR1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ROR1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927034
GTEX Portal (Tissue expression)ROR1-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ROR1-AS1
DMDM Disease mutations101927034
Blocks (Seattle)ROR1-AS1
Human Protein AtlasENSG00000223949
Protein Interaction databases
FunCoupENSG00000223949
BioGRIDROR1-AS1
STRING (EMBL)ROR1-AS1
ZODIACROR1-AS1
Ontologies - Pathways
Huge Navigator ROR1-AS1 [HugePedia]
snp3D : Map Gene to Disease101927034
BioCentury BCIQROR1-AS1
ClinGenROR1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927034
Clinical trialROR1-AS1
Miscellaneous
canSAR (ICR)ROR1-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineROR1-AS1
EVEXROR1-AS1
GoPubMedROR1-AS1
iHOPROR1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:36:39 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.