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RPL10L (ribosomal protein L10 like)

Identity

Alias_namesribosomal protein L10-like
Other aliasRPL10_5_1358
HGNC (Hugo) RPL10L
LocusID (NCBI) 140801
Atlas_Id 72786
Location 14q21.2  [Link to chromosome band 14q21]
Location_base_pair Starts at 46651016 and ends at 46651825 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RPL10L   17976
Cards
Entrez_Gene (NCBI)RPL10L  140801  ribosomal protein L10 like
AliasesRPL10_5_1358
GeneCards (Weizmann)RPL10L
Ensembl hg19 (Hinxton)ENSG00000165496 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000165496 [Gene_View]  chr14:46651016-46651825 [Contig_View]  RPL10L [Vega]
ICGC DataPortalENSG00000165496
TCGA cBioPortalRPL10L
AceView (NCBI)RPL10L
Genatlas (Paris)RPL10L
WikiGenes140801
SOURCE (Princeton)RPL10L
Genetics Home Reference (NIH)RPL10L
Genomic and cartography
GoldenPath hg38 (UCSC)RPL10L  -     chr14:46651016-46651825 -  14q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RPL10L  -     14q21.2   [Description]    (hg19-Feb_2009)
EnsemblRPL10L - 14q21.2 [CytoView hg19]  RPL10L - 14q21.2 [CytoView hg38]
Mapping of homologs : NCBIRPL10L [Mapview hg19]  RPL10L [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB063608 AK130863 AM392934 BC014310 BC066312
RefSeq transcript (Entrez)NM_080746
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RPL10L
Cluster EST : UnigeneHs.308332 [ NCBI ]
CGAP (NCI)Hs.308332
Alternative Splicing GalleryENSG00000165496
Gene ExpressionRPL10L [ NCBI-GEO ]   RPL10L [ EBI - ARRAY_EXPRESS ]   RPL10L [ SEEK ]   RPL10L [ MEM ]
Gene Expression Viewer (FireBrowse)RPL10L [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)140801
GTEX Portal (Tissue expression)RPL10L
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96L21   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96L21  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96L21
Splice isoforms : SwissVarQ96L21
PhosPhoSitePlusQ96L21
Domaine pattern : Prosite (Expaxy)RIBOSOMAL_L10E (PS01257)   
Domains : Interpro (EBI)Ribosomal_L10e    Ribosomal_L10e/L16    Ribosomal_L10e_CS   
Domain families : Pfam (Sanger)Ribosomal_L16 (PF00252)   
Domain families : Pfam (NCBI)pfam00252   
Conserved Domain (NCBI)RPL10L
DMDM Disease mutations140801
Blocks (Seattle)RPL10L
PDB (SRS)4UG0    4V6X    5T2C   
PDB (PDBSum)4UG0    4V6X    5T2C   
PDB (IMB)4UG0    4V6X    5T2C   
PDB (RSDB)4UG0    4V6X    5T2C   
Structural Biology KnowledgeBase4UG0    4V6X    5T2C   
SCOP (Structural Classification of Proteins)4UG0    4V6X    5T2C   
CATH (Classification of proteins structures)4UG0    4V6X    5T2C   
SuperfamilyQ96L21
Human Protein AtlasENSG00000165496
Peptide AtlasQ96L21
HPRD11753
IPIIPI00064765   
Protein Interaction databases
DIP (DOE-UCLA)Q96L21
IntAct (EBI)Q96L21
FunCoupENSG00000165496
BioGRIDRPL10L
STRING (EMBL)RPL10L
ZODIACRPL10L
Ontologies - Pathways
QuickGOQ96L21
Ontology : AmiGOribosomal large subunit assembly  structural constituent of ribosome  nucleus  polysome  translation  spermatogenesis  membrane  cytosolic large ribosomal subunit  cytosolic large ribosomal subunit  
Ontology : EGO-EBIribosomal large subunit assembly  structural constituent of ribosome  nucleus  polysome  translation  spermatogenesis  membrane  cytosolic large ribosomal subunit  cytosolic large ribosomal subunit  
Pathways : KEGGRibosome   
NDEx NetworkRPL10L
Atlas of Cancer Signalling NetworkRPL10L
Wikipedia pathwaysRPL10L
Orthology - Evolution
OrthoDB140801
GeneTree (enSembl)ENSG00000165496
Phylogenetic Trees/Animal Genes : TreeFamRPL10L
HOVERGENQ96L21
HOGENOMQ96L21
Homologs : HomoloGeneRPL10L
Homology/Alignments : Family Browser (UCSC)RPL10L
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRPL10L [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RPL10L
dbVarRPL10L
ClinVarRPL10L
1000_GenomesRPL10L 
Exome Variant ServerRPL10L
ExAC (Exome Aggregation Consortium)RPL10L (select the gene name)
Genetic variants : HAPMAP140801
Genomic Variants (DGV)RPL10L [DGVbeta]
DECIPHERRPL10L [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRPL10L 
Mutations
ICGC Data PortalRPL10L 
TCGA Data PortalRPL10L 
Broad Tumor PortalRPL10L
OASIS PortalRPL10L [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRPL10L  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRPL10L
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RPL10L
DgiDB (Drug Gene Interaction Database)RPL10L
DoCM (Curated mutations)RPL10L (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RPL10L (select a term)
intoGenRPL10L
Cancer3DRPL10L(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenRPL10L
Genetic Testing Registry RPL10L
NextProtQ96L21 [Medical]
TSGene140801
GENETestsRPL10L
Target ValidationRPL10L
Huge Navigator RPL10L [HugePedia]
snp3D : Map Gene to Disease140801
BioCentury BCIQRPL10L
ClinGenRPL10L
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD140801
Chemical/Pharm GKB GenePA34662
Clinical trialRPL10L
Miscellaneous
canSAR (ICR)RPL10L (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRPL10L
EVEXRPL10L
GoPubMedRPL10L
iHOPRPL10L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:39:11 CEST 2017

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