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RPL13AP17 (ribosomal protein L13a pseudogene 17)

Identity

Other aliasRPL13A_6_816
HGNC (Hugo) RPL13AP17
LocusID (NCBI) 399670
Atlas_Id 72790
Location 7q21.11  [Link to chromosome band 7q21]
Location_base_pair Starts at 77976559 and ends at 77988770 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RPL13AP17   36167
Cards
Entrez_Gene (NCBI)RPL13AP17  399670  ribosomal protein L13a pseudogene 17
AliasesRPL13A_6_816
GeneCards (Weizmann)RPL13AP17
Ensembl hg19 (Hinxton)ENSG00000231322 [Gene_View]  chr7:77976559-77988770 [Contig_View]  RPL13AP17 [Vega]
Ensembl hg38 (Hinxton)ENSG00000231322 [Gene_View]  chr7:77976559-77988770 [Contig_View]  RPL13AP17 [Vega]
ICGC DataPortalENSG00000231322
TCGA cBioPortalRPL13AP17
AceView (NCBI)RPL13AP17
Genatlas (Paris)RPL13AP17
WikiGenes399670
SOURCE (Princeton)RPL13AP17
Genetics Home Reference (NIH)RPL13AP17
Genomic and cartography
GoldenPath hg19 (UCSC)RPL13AP17  -     chr7:77976559-77988770 +  7q21.11   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)RPL13AP17  -     7q21.11   [Description]    (hg38-Dec_2013)
EnsemblRPL13AP17 - 7q21.11 [CytoView hg19]  RPL13AP17 - 7q21.11 [CytoView hg38]
Mapping of homologs : NCBIRPL13AP17 [Mapview hg19]  RPL13AP17 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC027852
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000007 NC_018918 NG_011487 NT_007933 NW_004929332
Consensus coding sequences : CCDS (NCBI)RPL13AP17
Cluster EST : UnigeneHs.568045 [ NCBI ]
CGAP (NCI)Hs.568045
Alternative Splicing GalleryENSG00000231322
Gene ExpressionRPL13AP17 [ NCBI-GEO ]   RPL13AP17 [ EBI - ARRAY_EXPRESS ]   RPL13AP17 [ SEEK ]   RPL13AP17 [ MEM ]
Gene Expression Viewer (FireBrowse)RPL13AP17 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)399670
GTEX Portal (Tissue expression)RPL13AP17
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RPL13AP17
DMDM Disease mutations399670
Blocks (Seattle)RPL13AP17
Human Protein AtlasENSG00000231322
HPRD14588
Protein Interaction databases
FunCoupENSG00000231322
BioGRIDRPL13AP17
STRING (EMBL)RPL13AP17
ZODIACRPL13AP17
Ontologies - Pathways
Huge Navigator RPL13AP17 [HugePedia]
snp3D : Map Gene to Disease399670
BioCentury BCIQRPL13AP17
ClinGenRPL13AP17
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD399670
Clinical trialRPL13AP17
Miscellaneous
canSAR (ICR)RPL13AP17 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRPL13AP17
EVEXRPL13AP17
GoPubMedRPL13AP17
iHOPRPL13AP17
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:41:37 CET 2017

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