Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

RPL13AP5 (ribosomal protein L13a pseudogene 5)

Identity

Alias_symbol (synonym)bA196N24.2
Other aliasRPL13A_8_1086
HGNC (Hugo) RPL13AP5
LocusID (NCBI) 728658
Atlas_Id 72793
Location 10q24.1  [Link to chromosome band 10q24]
Location_base_pair Starts at 96750266 and ends at 96750923 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RPL13AP5   23736
Cards
Entrez_Gene (NCBI)RPL13AP5  728658  ribosomal protein L13a pseudogene 5
AliasesRPL13A_8_1086; bA196N24.2
GeneCards (Weizmann)RPL13AP5
Ensembl hg19 (Hinxton)ENSG00000236552 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000236552 [Gene_View]  chr10:96750266-96750923 [Contig_View]  RPL13AP5 [Vega]
ICGC DataPortalENSG00000236552
TCGA cBioPortalRPL13AP5
AceView (NCBI)RPL13AP5
Genatlas (Paris)RPL13AP5
WikiGenes728658
SOURCE (Princeton)RPL13AP5
Genetics Home Reference (NIH)RPL13AP5
Genomic and cartography
GoldenPath hg38 (UCSC)RPL13AP5  -     chr10:96750266-96750923 +  10q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RPL13AP5  -     10q24.1   [Description]    (hg19-Feb_2009)
EnsemblRPL13AP5 - 10q24.1 [CytoView hg19]  RPL13AP5 - 10q24.1 [CytoView hg38]
Mapping of homologs : NCBIRPL13AP5 [Mapview hg19]  RPL13AP5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)CD173238
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RPL13AP5
Cluster EST : UnigeneHs.645344 [ NCBI ]
CGAP (NCI)Hs.645344
Alternative Splicing GalleryENSG00000236552
Gene ExpressionRPL13AP5 [ NCBI-GEO ]   RPL13AP5 [ EBI - ARRAY_EXPRESS ]   RPL13AP5 [ SEEK ]   RPL13AP5 [ MEM ]
Gene Expression Viewer (FireBrowse)RPL13AP5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)728658
GTEX Portal (Tissue expression)RPL13AP5
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RPL13AP5
DMDM Disease mutations728658
Blocks (Seattle)RPL13AP5
Human Protein AtlasENSG00000236552
Protein Interaction databases
FunCoupENSG00000236552
BioGRIDRPL13AP5
STRING (EMBL)RPL13AP5
ZODIACRPL13AP5
Ontologies - Pathways
Huge Navigator RPL13AP5 [HugePedia]
snp3D : Map Gene to Disease728658
BioCentury BCIQRPL13AP5
ClinGenRPL13AP5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728658
Chemical/Pharm GKB GenePA134990691
Clinical trialRPL13AP5
Miscellaneous
canSAR (ICR)RPL13AP5 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRPL13AP5
EVEXRPL13AP5
GoPubMedRPL13AP5
iHOPRPL13AP5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:36:42 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.