RPL17 (ribosomal protein L17)

2014-11-01  

Identity

HGNC
LOCATION
18q21.1
LOCUSID
ALIAS
L17,PD-1,RPL23

Other Information

Locus ID:

NCBI: 6139
MIM: 603661
HGNC: 10307
Ensembl: ENSG00000265681

Variants:

dbSNP: 6139
ClinVar: 6139
TCGA: ENSG00000265681
COSMIC: RPL17

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000265681ENST00000578528J3KSJ0
ENSG00000265681ENST00000578532J3QQT2
ENSG00000265681ENST00000579248P18621
ENSG00000265681ENST00000579248A0A024R261
ENSG00000265681ENST00000579408P18621
ENSG00000265681ENST00000579408A0A024R261
ENSG00000265681ENST00000580210J3QLC8
ENSG00000265681ENST00000580261P18621
ENSG00000265681ENST00000580261A0A024R261
ENSG00000265681ENST00000580387J3KRB3
ENSG00000265681ENST00000581373P18621
ENSG00000265681ENST00000583036J3QS96
ENSG00000265681ENST00000583637J3KRX5
ENSG00000265681ENST00000615479A0A087WY81
ENSG00000265681ENST00000615760A0A087WWH0
ENSG00000265681ENST00000617346A0A087WXM6
ENSG00000265681ENST00000618613P18621
ENSG00000265681ENST00000618613A0A024R261
ENSG00000265681ENST00000618619P18621
ENSG00000265681ENST00000618619A0A024R261

Expression (GTEx)

0
500
1000
1500
2000
2500
3000
3500

Pathways

PathwaySourceExternal ID
RibosomeKEGGko03010
RibosomeKEGGhsa03010
Ribosome, eukaryotesKEGGhsa_M00177
Ribosome, eukaryotesKEGGM00177
Metabolism of proteinsREACTOMER-HSA-392499
TranslationREACTOMER-HSA-72766
Eukaryotic Translation InitiationREACTOMER-HSA-72613
Cap-dependent Translation InitiationREACTOMER-HSA-72737
Formation of a pool of free 40S subunitsREACTOMER-HSA-72689
GTP hydrolysis and joining of the 60S ribosomal subunitREACTOMER-HSA-72706
L13a-mediated translational silencing of Ceruloplasmin expressionREACTOMER-HSA-156827
SRP-dependent cotranslational protein targeting to membraneREACTOMER-HSA-1799339
Eukaryotic Translation ElongationREACTOMER-HSA-156842
Peptide chain elongationREACTOMER-HSA-156902
Eukaryotic Translation TerminationREACTOMER-HSA-72764
DiseaseREACTOMER-HSA-1643685
Infectious diseaseREACTOMER-HSA-5663205
Influenza InfectionREACTOMER-HSA-168254
Influenza Life CycleREACTOMER-HSA-168255
Influenza Viral RNA Transcription and ReplicationREACTOMER-HSA-168273
Viral mRNA TranslationREACTOMER-HSA-192823
Gene ExpressionREACTOMER-HSA-74160
Nonsense-Mediated Decay (NMD)REACTOMER-HSA-927802
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)REACTOMER-HSA-975957
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)REACTOMER-HSA-975956
MetabolismREACTOMER-HSA-1430728
Metabolism of amino acids and derivativesREACTOMER-HSA-71291
Selenoamino acid metabolismREACTOMER-HSA-2408522
Selenocysteine synthesisREACTOMER-HSA-2408557
rRNA processingREACTOMER-HSA-72312
Major pathway of rRNA processing in the nucleolus and cytosolREACTOMER-HSA-6791226
rRNA processing in the nucleus and cytosolREACTOMER-HSA-8868773

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
301030682018Integrated profiling of phenotype and blood transcriptome for stress vulnerability and depression.2

Citation

Dessen P

RPL17 (ribosomal protein L17)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/72797/rpl17