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RPL26L1 (ribosomal protein L26 like 1)

Identity

Alias_namesRPL26P1
ribosomal protein L26 pseudogene 1
ribosomal protein L26-like 1
Other alias
HGNC (Hugo) RPL26L1
LocusID (NCBI) 51121
Atlas_Id 72815
Location 5q35.1  [Link to chromosome band 5q35]
Location_base_pair Starts at 172958909 and ends at 172969771 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RPL26L1   17050
Cards
Entrez_Gene (NCBI)RPL26L1  51121  ribosomal protein L26 like 1
AliasesRPL26P1
GeneCards (Weizmann)RPL26L1
Ensembl hg19 (Hinxton)ENSG00000037241 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000037241 [Gene_View]  chr5:172958909-172969771 [Contig_View]  RPL26L1 [Vega]
ICGC DataPortalENSG00000037241
TCGA cBioPortalRPL26L1
AceView (NCBI)RPL26L1
Genatlas (Paris)RPL26L1
WikiGenes51121
SOURCE (Princeton)RPL26L1
Genetics Home Reference (NIH)RPL26L1
Genomic and cartography
GoldenPath hg38 (UCSC)RPL26L1  -     chr5:172958909-172969771 +  5q35.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RPL26L1  -     5q35.1   [Description]    (hg19-Feb_2009)
EnsemblRPL26L1 - 5q35.1 [CytoView hg19]  RPL26L1 - 5q35.1 [CytoView hg38]
Mapping of homologs : NCBIRPL26L1 [Mapview hg19]  RPL26L1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF083248 AK128872 BC009766 BC017360 BC070192
RefSeq transcript (Entrez)NM_001317980 NM_001317981 NM_001317982 NM_016093
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RPL26L1
Cluster EST : UnigeneHs.546390 [ NCBI ]
CGAP (NCI)Hs.546390
Alternative Splicing GalleryENSG00000037241
Gene ExpressionRPL26L1 [ NCBI-GEO ]   RPL26L1 [ EBI - ARRAY_EXPRESS ]   RPL26L1 [ SEEK ]   RPL26L1 [ MEM ]
Gene Expression Viewer (FireBrowse)RPL26L1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51121
GTEX Portal (Tissue expression)RPL26L1
Human Protein AtlasENSG00000037241-RPL26L1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UNX3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UNX3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UNX3
Splice isoforms : SwissVarQ9UNX3
PhosPhoSitePlusQ9UNX3
Domaine pattern : Prosite (Expaxy)RIBOSOMAL_L24 (PS01108)   
Domains : Interpro (EBI)KOW    Rib_L2_dom2    Ribosomal_L24/26_CS    Ribosomal_L26/L24P_euk/arc    Translation_prot_SH3-like   
Domain families : Pfam (Sanger)KOW (PF00467)    Ribosomal_L26 (PF16906)   
Domain families : Pfam (NCBI)pfam00467    pfam16906   
Domain families : Smart (EMBL)KOW (SM00739)  
Conserved Domain (NCBI)RPL26L1
DMDM Disease mutations51121
Blocks (Seattle)RPL26L1
SuperfamilyQ9UNX3
Human Protein Atlas [tissue]ENSG00000037241-RPL26L1 [tissue]
Peptide AtlasQ9UNX3
HPRD17993
IPIIPI00007144   IPI00979930   IPI00977345   
Protein Interaction databases
DIP (DOE-UCLA)Q9UNX3
IntAct (EBI)Q9UNX3
FunCoupENSG00000037241
BioGRIDRPL26L1
STRING (EMBL)RPL26L1
ZODIACRPL26L1
Ontologies - Pathways
QuickGOQ9UNX3
Ontology : AmiGOstructural constituent of ribosome  translation  large ribosomal subunit  extracellular exosome  
Ontology : EGO-EBIstructural constituent of ribosome  translation  large ribosomal subunit  extracellular exosome  
Pathways : KEGGRibosome   
NDEx NetworkRPL26L1
Atlas of Cancer Signalling NetworkRPL26L1
Wikipedia pathwaysRPL26L1
Orthology - Evolution
OrthoDB51121
GeneTree (enSembl)ENSG00000037241
Phylogenetic Trees/Animal Genes : TreeFamRPL26L1
HOVERGENQ9UNX3
HOGENOMQ9UNX3
Homologs : HomoloGeneRPL26L1
Homology/Alignments : Family Browser (UCSC)RPL26L1
Gene fusions - Rearrangements
Tumor Fusion PortalRPL26L1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRPL26L1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RPL26L1
dbVarRPL26L1
ClinVarRPL26L1
1000_GenomesRPL26L1 
Exome Variant ServerRPL26L1
ExAC (Exome Aggregation Consortium)ENSG00000037241
GNOMAD BrowserENSG00000037241
Genetic variants : HAPMAP51121
Genomic Variants (DGV)RPL26L1 [DGVbeta]
DECIPHERRPL26L1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRPL26L1 
Mutations
ICGC Data PortalRPL26L1 
TCGA Data PortalRPL26L1 
Broad Tumor PortalRPL26L1
OASIS PortalRPL26L1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRPL26L1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRPL26L1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RPL26L1
DgiDB (Drug Gene Interaction Database)RPL26L1
DoCM (Curated mutations)RPL26L1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RPL26L1 (select a term)
intoGenRPL26L1
Cancer3DRPL26L1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETRPL26L1
MedgenRPL26L1
Genetic Testing Registry RPL26L1
NextProtQ9UNX3 [Medical]
TSGene51121
GENETestsRPL26L1
Target ValidationRPL26L1
Huge Navigator RPL26L1 [HugePedia]
snp3D : Map Gene to Disease51121
BioCentury BCIQRPL26L1
ClinGenRPL26L1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51121
Chemical/Pharm GKB GenePA34706
Clinical trialRPL26L1
Miscellaneous
canSAR (ICR)RPL26L1 (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRPL26L1
EVEXRPL26L1
GoPubMedRPL26L1
iHOPRPL26L1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:12:57 CET 2017

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