| Nomenclature |
|---|
| HGNC (Hugo) | RPL35 10344 |
| Cards |
|---|
| Entrez_Gene (NCBI) | RPL35 11224 ribosomal protein L35 |
| Aliases | L35 |
| GeneCards (Weizmann) | RPL35 |
| Ensembl hg19 (Hinxton) | ENSG00000136942 [Gene_View] |
| Ensembl hg38 (Hinxton) | ENSG00000136942 [Gene_View] chr9:124857879-124861961 [Contig_View] RPL35 [Vega] |
| ICGC DataPortal | ENSG00000136942 |
| TCGA cBioPortal | RPL35 |
| AceView (NCBI) | RPL35 |
| Genatlas (Paris) | RPL35 |
| WikiGenes | 11224 |
| SOURCE (Princeton) | RPL35 |
| Genetics Home Reference (NIH) | RPL35 |
| Genomic and cartography |
|---|
| GoldenPath hg38 (UCSC) | RPL35 - chr9:124857879-124861961 - 9q33.3 [Description] (hg38-Dec_2013) |
| GoldenPath hg19 (UCSC) | RPL35 - 9q33.3 [Description] (hg19-Feb_2009) |
| Ensembl | RPL35 - 9q33.3 [CytoView hg19] RPL35 - 9q33.3 [CytoView hg38] |
| Mapping of homologs : NCBI | RPL35 [Mapview hg19] RPL35 [Mapview hg38] |
| Gene and transcription |
|---|
| Genbank (Entrez) | AK291072 BC000348 BC010919 BC071915 BC094828 |
| RefSeq transcript (Entrez) | NM_007209 |
| RefSeq genomic (Entrez) | |
| Consensus coding sequences : CCDS (NCBI) | RPL35 |
| Cluster EST : Unigene | Hs.182825 [ NCBI ] |
| CGAP (NCI) | Hs.182825 |
| Alternative Splicing Gallery | ENSG00000136942 |
| Gene Expression | RPL35 [ NCBI-GEO ] RPL35 [ EBI - ARRAY_EXPRESS ]
RPL35 [ SEEK ] RPL35 [ MEM ] |
| Gene Expression Viewer (FireBrowse) | RPL35 [ Firebrowse - Broad ] |
| SOURCE (Princeton) | Expression in : [Datasets] [Normal Tissue Atlas] [carcinoma Classsification] [NCI60] |
| Genevisible | Expression in : [tissues] [cell-lines] [cancer] [perturbations] |
| BioGPS (Tissue expression) | 11224 |
| GTEX Portal (Tissue expression) | RPL35 |
| Protein : pattern, domain, 3D structure |
|---|
| UniProt/SwissProt | P42766 [function] [subcellular_location] [family_and_domains] [pathology_and_biotech] [ptm_processing] [expression] [interaction] |
| NextProt | P42766 [Sequence] [Exons] [Medical] [Publications] |
| With graphics : InterPro | P42766 |
| Splice isoforms : SwissVar | P42766 |
| PhosPhoSitePlus | P42766 |
| Domaine pattern : Prosite (Expaxy) | RIBOSOMAL_L29 (PS00579) |
| Domains : Interpro (EBI) | Ribosomal_L29 Ribosomal_L29_CS |
| Domain families : Pfam (Sanger) | Ribosomal_L29 (PF00831) |
| Domain families : Pfam (NCBI) | pfam00831 |
| Conserved Domain (NCBI) | RPL35 |
| DMDM Disease mutations | 11224 |
| Blocks (Seattle) | RPL35 |
| PDB (SRS) | 4UG0 4V6X 5AJ0 5T2C |
| PDB (PDBSum) | 4UG0 4V6X 5AJ0 5T2C |
| PDB (IMB) | 4UG0 4V6X 5AJ0 5T2C |
| PDB (RSDB) | 4UG0 4V6X 5AJ0 5T2C |
| Structural Biology KnowledgeBase | 4UG0 4V6X 5AJ0 5T2C |
| SCOP (Structural Classification of Proteins) | 4UG0 4V6X 5AJ0 5T2C |
| CATH (Classification of proteins structures) | 4UG0 4V6X 5AJ0 5T2C |
| Superfamily | P42766 |
| Human Protein Atlas | ENSG00000136942 |
| Peptide Atlas | P42766 |
| HPRD | 10200 |
| IPI | IPI00412607 IPI00455757 IPI01014264 IPI00550247 |
| Protein Interaction databases |
|---|
| DIP (DOE-UCLA) | P42766 |
| IntAct (EBI) | P42766 |
| FunCoup | ENSG00000136942 |
| BioGRID | RPL35 |
| STRING (EMBL) | RPL35 |
| ZODIAC | RPL35 |
| Ontologies - Pathways |
|---|
| QuickGO | P42766 |
| Ontology : AmiGO | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) RNA binding mRNA binding structural constituent of ribosome structural constituent of ribosome nucleolus cytosol rRNA processing translation translation translational initiation SRP-dependent cotranslational protein targeting to membrane membrane viral transcription cytosolic large ribosomal subunit |
| Ontology : EGO-EBI | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) RNA binding mRNA binding structural constituent of ribosome structural constituent of ribosome nucleolus cytosol rRNA processing translation translation translational initiation SRP-dependent cotranslational protein targeting to membrane membrane viral transcription cytosolic large ribosomal subunit |
| Pathways : KEGG | Ribosome |
| NDEx Network | RPL35 |
| Atlas of Cancer Signalling Network | RPL35 |
| Wikipedia pathways | RPL35 |
| Orthology - Evolution |
|---|
| OrthoDB | 11224 |
| GeneTree (enSembl) | ENSG00000136942 |
| Phylogenetic Trees/Animal Genes : TreeFam | RPL35 |
| HOVERGEN | P42766 |
| HOGENOM | P42766 |
| Homologs : HomoloGene | RPL35 |
| Homology/Alignments : Family Browser (UCSC) | RPL35 |
| Gene fusions - Rearrangements |
|---|
| Polymorphisms : SNP and Copy number variants |
|---|
| NCBI Variation Viewer | RPL35 [hg38] |
| dbSNP Single Nucleotide Polymorphism (NCBI) | RPL35 |
| dbVar | RPL35 |
| ClinVar | RPL35 |
| 1000_Genomes | RPL35 |
| Exome Variant Server | RPL35 |
| ExAC (Exome Aggregation Consortium) | RPL35 (select the gene name) |
| Genetic variants : HAPMAP | 11224 |
| Genomic Variants (DGV) | RPL35 [DGVbeta] |
| DECIPHER | RPL35 [patients] [syndromes] [variants] [genes] |
| CONAN: Copy Number Analysis | RPL35 |
| Mutations |
|---|
| ICGC Data Portal | RPL35 |
| TCGA Data Portal | RPL35 |
| Broad Tumor Portal | RPL35 |
| OASIS Portal | RPL35 [ Somatic mutations - Copy number] |
| Somatic Mutations in Cancer : COSMIC | RPL35 [overview] [genome browser] [tissue] [distribution] |
| Mutations and Diseases : HGMD | RPL35 |
| LOVD (Leiden Open Variation Database) | Whole genome datasets |
| LOVD (Leiden Open Variation Database) | LOVD 3.0 shared installation |
| BioMuta | search RPL35 |
| DgiDB (Drug Gene Interaction Database) | RPL35 |
| DoCM (Curated mutations) | RPL35 (select the gene name) |
| CIViC (Clinical Interpretations of Variants in Cancer) | RPL35 (select a term) |
| intoGen | RPL35 |
| Cancer3D | RPL35(select the gene name) |
| Impact of mutations | [PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser] |
| Diseases |
|---|
| OMIM | |
| Orphanet | |
| Medgen | RPL35 |
| Genetic Testing Registry | RPL35
|
| NextProt | P42766 [Medical] |
| TSGene | 11224 |
| GENETests | RPL35 |
| Target Validation | RPL35 |
| Huge Navigator |
RPL35 [HugePedia] |
| snp3D : Map Gene to Disease | 11224 |
| BioCentury BCIQ | RPL35 |
| ClinGen | RPL35 |
| Clinical trials, drugs, therapy |
|---|
| Chemical/Protein Interactions : CTD | 11224 |
| Chemical/Pharm GKB Gene | PA34727 |
| Clinical trial | RPL35 |
| Miscellaneous |
|---|
| canSAR (ICR) | RPL35 (select the gene name) |
| Probes |
|---|
| Litterature |
|---|
| PubMed | 49 Pubmed reference(s) in Entrez |
| GeneRIFs | Gene References Into Functions (Entrez) |
| CoreMine | RPL35 |
| EVEX | RPL35 |
| GoPubMed | RPL35 |
| iHOP | RPL35 |
