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RPL36AL (ribosomal protein L36a like)

Identity

Alias_namesRPL36A
ribosomal protein L36a
ribosomal protein L36a-like
Other alias
HGNC (Hugo) RPL36AL
LocusID (NCBI) 6166
Atlas_Id 72827
Location 14q21.3  [Link to chromosome band 14q21]
Location_base_pair Starts at 49618689 and ends at 49620685 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RPL36AL   10346
Cards
Entrez_Gene (NCBI)RPL36AL  6166  ribosomal protein L36a like
AliasesRPL36A
GeneCards (Weizmann)RPL36AL
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr14:49618689-49620685 [Contig_View]  RPL36AL [Vega]
TCGA cBioPortalRPL36AL
AceView (NCBI)RPL36AL
Genatlas (Paris)RPL36AL
WikiGenes6166
SOURCE (Princeton)RPL36AL
Genetics Home Reference (NIH)RPL36AL
Genomic and cartography
GoldenPath hg38 (UCSC)RPL36AL  -     chr14:49618689-49620685 -  14q21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RPL36AL  -     14q21.3   [Description]    (hg19-Feb_2009)
EnsemblRPL36AL - 14q21.3 [CytoView hg19]  RPL36AL - 14q21.3 [CytoView hg38]
Mapping of homologs : NCBIRPL36AL [Mapview hg19]  RPL36AL [Mapview hg38]
OMIM180469   
Gene and transcription
Genbank (Entrez)AB063609 AK311959 BC000741 BC003145 BC070207
RefSeq transcript (Entrez)NM_001001
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RPL36AL
Cluster EST : UnigeneHs.745129 [ NCBI ]
CGAP (NCI)Hs.745129
Gene ExpressionRPL36AL [ NCBI-GEO ]   RPL36AL [ EBI - ARRAY_EXPRESS ]   RPL36AL [ SEEK ]   RPL36AL [ MEM ]
Gene Expression Viewer (FireBrowse)RPL36AL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6166
GTEX Portal (Tissue expression)RPL36AL
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ969Q0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ969Q0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ969Q0
Splice isoforms : SwissVarQ969Q0
PhosPhoSitePlusQ969Q0
Domaine pattern : Prosite (Expaxy)RIBOSOMAL_L44E (PS01172)   
Domains : Interpro (EBI)Ribosomal_L44e    Ribosomal_zn-bd   
Domain families : Pfam (Sanger)Ribosomal_L44 (PF00935)   
Domain families : Pfam (NCBI)pfam00935   
Domain structure : Prodom (Prabi Lyon)Ribosomal_L44e (PD002841)   
Conserved Domain (NCBI)RPL36AL
DMDM Disease mutations6166
Blocks (Seattle)RPL36AL
SuperfamilyQ969Q0
Peptide AtlasQ969Q0
HPRD01597
IPIIPI00056494   
Protein Interaction databases
DIP (DOE-UCLA)Q969Q0
IntAct (EBI)Q969Q0
BioGRIDRPL36AL
STRING (EMBL)RPL36AL
ZODIACRPL36AL
Ontologies - Pathways
QuickGOQ969Q0
Ontology : AmiGOstructural constituent of ribosome  protein binding  nucleus  cytosol  plasma membrane  translation  cytosolic large ribosomal subunit  
Ontology : EGO-EBIstructural constituent of ribosome  protein binding  nucleus  cytosol  plasma membrane  translation  cytosolic large ribosomal subunit  
Pathways : KEGGRibosome   
NDEx NetworkRPL36AL
Atlas of Cancer Signalling NetworkRPL36AL
Wikipedia pathwaysRPL36AL
Orthology - Evolution
OrthoDB6166
Phylogenetic Trees/Animal Genes : TreeFamRPL36AL
HOVERGENQ969Q0
HOGENOMQ969Q0
Homologs : HomoloGeneRPL36AL
Homology/Alignments : Family Browser (UCSC)RPL36AL
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRPL36AL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RPL36AL
dbVarRPL36AL
ClinVarRPL36AL
1000_GenomesRPL36AL 
Exome Variant ServerRPL36AL
ExAC (Exome Aggregation Consortium)RPL36AL (select the gene name)
Genetic variants : HAPMAP6166
Genomic Variants (DGV)RPL36AL [DGVbeta]
DECIPHERRPL36AL [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRPL36AL 
Mutations
ICGC Data PortalRPL36AL 
TCGA Data PortalRPL36AL 
Broad Tumor PortalRPL36AL
OASIS PortalRPL36AL [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRPL36AL  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRPL36AL
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RPL36AL
DgiDB (Drug Gene Interaction Database)RPL36AL
DoCM (Curated mutations)RPL36AL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RPL36AL (select a term)
intoGenRPL36AL
Cancer3DRPL36AL(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM180469   
Orphanet
MedgenRPL36AL
Genetic Testing Registry RPL36AL
NextProtQ969Q0 [Medical]
TSGene6166
GENETestsRPL36AL
Target ValidationRPL36AL
Huge Navigator RPL36AL [HugePedia]
snp3D : Map Gene to Disease6166
BioCentury BCIQRPL36AL
ClinGenRPL36AL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD6166
Chemical/Pharm GKB GenePA34732
Clinical trialRPL36AL
Miscellaneous
canSAR (ICR)RPL36AL (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRPL36AL
EVEXRPL36AL
GoPubMedRPL36AL
iHOPRPL36AL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:36:47 CEST 2017

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