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RPL36AP40 (ribosomal protein L36a pseudogene 40)

Identity

Other aliasRPL36A_15_1127
HGNC (Hugo) RPL36AP40
LocusID (NCBI) 554234
Atlas_Id 72829
Location 11p14.3  [Link to chromosome band 11p14]
Location_base_pair Starts at 25588376 and ends at 25588867 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)RPL36AP40   36300
Cards
Entrez_Gene (NCBI)RPL36AP40  554234  ribosomal protein L36a pseudogene 40
AliasesRPL36A_15_1127
GeneCards (Weizmann)RPL36AP40
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr11:25588376-25588867 [Contig_View]  RPL36AP40 [Vega]
TCGA cBioPortalRPL36AP40
AceView (NCBI)RPL36AP40
Genatlas (Paris)RPL36AP40
WikiGenes554234
SOURCE (Princeton)RPL36AP40
Genetics Home Reference (NIH)RPL36AP40
Genomic and cartography
GoldenPath hg38 (UCSC)RPL36AP40  -     chr11:25588376-25588867 -  11p14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RPL36AP40  -     11p14.3   [Description]    (hg19-Feb_2009)
EnsemblRPL36AP40 - 11p14.3 [CytoView hg19]  RPL36AP40 - 11p14.3 [CytoView hg38]
Mapping of homologs : NCBIRPL36AP40 [Mapview hg19]  RPL36AP40 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC058160
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RPL36AP40
Cluster EST : UnigeneHs.502159 [ NCBI ]
CGAP (NCI)Hs.502159
Gene ExpressionRPL36AP40 [ NCBI-GEO ]   RPL36AP40 [ EBI - ARRAY_EXPRESS ]   RPL36AP40 [ SEEK ]   RPL36AP40 [ MEM ]
Gene Expression Viewer (FireBrowse)RPL36AP40 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)554234
GTEX Portal (Tissue expression)RPL36AP40
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RPL36AP40
DMDM Disease mutations554234
Blocks (Seattle)RPL36AP40
IPIIPI00447443   
Protein Interaction databases
BioGRIDRPL36AP40
STRING (EMBL)RPL36AP40
ZODIACRPL36AP40
Ontologies - Pathways
Huge Navigator RPL36AP40 [HugePedia]
snp3D : Map Gene to Disease554234
BioCentury BCIQRPL36AP40
ClinGenRPL36AP40
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD554234
Clinical trialRPL36AP40
Miscellaneous
canSAR (ICR)RPL36AP40 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRPL36AP40
EVEXRPL36AP40
GoPubMedRPL36AP40
iHOPRPL36AP40
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 20:10:37 CET 2017

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