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RPL37 (ribosomal protein L37)

Identity

Alias_symbol (synonym)L37
Other alias
HGNC (Hugo) RPL37
LocusID (NCBI) 6167
Atlas_Id 72830
Location 5p13.1  [Link to chromosome band 5p13]
Location_base_pair Starts at 40831328 and ends at 40835285 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MBOAT1 (6p22.3) / RPL37 (5p13.1)RPL37 (5p13.1) / CFLAR (2q33.1)RPL37 (5p13.1) / LOC254100 ()
RPL37 (5p13.1) / UBR5 (8q22.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RPL37   10347
Cards
Entrez_Gene (NCBI)RPL37  6167  ribosomal protein L37
AliasesL37
GeneCards (Weizmann)RPL37
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:40831328-40835285 [Contig_View]  RPL37 [Vega]
TCGA cBioPortalRPL37
AceView (NCBI)RPL37
Genatlas (Paris)RPL37
WikiGenes6167
SOURCE (Princeton)RPL37
Genetics Home Reference (NIH)RPL37
Genomic and cartography
GoldenPath hg38 (UCSC)RPL37  -     chr5:40831328-40835285 -  5p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RPL37  -     5p13.1   [Description]    (hg19-Feb_2009)
EnsemblRPL37 - 5p13.1 [CytoView hg19]  RPL37 - 5p13.1 [CytoView hg38]
Mapping of homologs : NCBIRPL37 [Mapview hg19]  RPL37 [Mapview hg38]
OMIM604181   
Gene and transcription
Genbank (Entrez)AB055770 AK311827 BC067790 BC070206 BC079477
RefSeq transcript (Entrez)NM_000997
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RPL37
Cluster EST : UnigeneHs.731513 [ NCBI ]
CGAP (NCI)Hs.731513
Gene ExpressionRPL37 [ NCBI-GEO ]   RPL37 [ EBI - ARRAY_EXPRESS ]   RPL37 [ SEEK ]   RPL37 [ MEM ]
Gene Expression Viewer (FireBrowse)RPL37 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6167
GTEX Portal (Tissue expression)RPL37
Protein : pattern, domain, 3D structure
UniProt/SwissProtP61927   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP61927  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP61927
Splice isoforms : SwissVarP61927
PhosPhoSitePlusP61927
Domaine pattern : Prosite (Expaxy)RIBOSOMAL_L37E (PS01077)   
Domains : Interpro (EBI)Ribosomal_L37ae/L37e    Ribosomal_L37e    Ribosomal_L37e_CS    Ribosomal_zn-bd   
Domain families : Pfam (Sanger)Ribosomal_L37e (PF01907)   
Domain families : Pfam (NCBI)pfam01907   
Domain structure : Prodom (Prabi Lyon)Ribosomal_L37e (PD005132)   
Conserved Domain (NCBI)RPL37
DMDM Disease mutations6167
Blocks (Seattle)RPL37
PDB (SRS)4UG0    4V6X    5AJ0    5T2C   
PDB (PDBSum)4UG0    4V6X    5AJ0    5T2C   
PDB (IMB)4UG0    4V6X    5AJ0    5T2C   
PDB (RSDB)4UG0    4V6X    5AJ0    5T2C   
Structural Biology KnowledgeBase4UG0    4V6X    5AJ0    5T2C   
SCOP (Structural Classification of Proteins)4UG0    4V6X    5AJ0    5T2C   
CATH (Classification of proteins structures)4UG0    4V6X    5AJ0    5T2C   
SuperfamilyP61927
Peptide AtlasP61927
HPRD16047
IPIIPI00220871   IPI00965400   IPI00966876   
Protein Interaction databases
DIP (DOE-UCLA)P61927
IntAct (EBI)P61927
BioGRIDRPL37
STRING (EMBL)RPL37
ZODIACRPL37
Ontologies - Pathways
QuickGOP61927
Ontology : AmiGOnuclear-transcribed mRNA catabolic process, nonsense-mediated decay  RNA binding  structural constituent of ribosome  structural constituent of ribosome  cytosol  rRNA processing  translation  translation  translational initiation  SRP-dependent cotranslational protein targeting to membrane  viral transcription  growth factor binding  rRNA binding  cytosolic large ribosomal subunit  cytosolic large ribosomal subunit  metal ion binding  
Ontology : EGO-EBInuclear-transcribed mRNA catabolic process, nonsense-mediated decay  RNA binding  structural constituent of ribosome  structural constituent of ribosome  cytosol  rRNA processing  translation  translation  translational initiation  SRP-dependent cotranslational protein targeting to membrane  viral transcription  growth factor binding  rRNA binding  cytosolic large ribosomal subunit  cytosolic large ribosomal subunit  metal ion binding  
Pathways : KEGGRibosome   
NDEx NetworkRPL37
Atlas of Cancer Signalling NetworkRPL37
Wikipedia pathwaysRPL37
Orthology - Evolution
OrthoDB6167
Phylogenetic Trees/Animal Genes : TreeFamRPL37
HOVERGENP61927
HOGENOMP61927
Homologs : HomoloGeneRPL37
Homology/Alignments : Family Browser (UCSC)RPL37
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRPL37 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RPL37
dbVarRPL37
ClinVarRPL37
1000_GenomesRPL37 
Exome Variant ServerRPL37
ExAC (Exome Aggregation Consortium)RPL37 (select the gene name)
Genetic variants : HAPMAP6167
Genomic Variants (DGV)RPL37 [DGVbeta]
DECIPHERRPL37 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRPL37 
Mutations
ICGC Data PortalRPL37 
TCGA Data PortalRPL37 
Broad Tumor PortalRPL37
OASIS PortalRPL37 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRPL37  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRPL37
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RPL37
DgiDB (Drug Gene Interaction Database)RPL37
DoCM (Curated mutations)RPL37 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RPL37 (select a term)
intoGenRPL37
Cancer3DRPL37(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM604181   
Orphanet
MedgenRPL37
Genetic Testing Registry RPL37
NextProtP61927 [Medical]
TSGene6167
GENETestsRPL37
Target ValidationRPL37
Huge Navigator RPL37 [HugePedia]
snp3D : Map Gene to Disease6167
BioCentury BCIQRPL37
ClinGenRPL37
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD6167
Chemical/Pharm GKB GenePA34736
Clinical trialRPL37
Miscellaneous
canSAR (ICR)RPL37 (select the gene name)
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRPL37
EVEXRPL37
GoPubMedRPL37
iHOPRPL37
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:36:47 CEST 2017

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