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RPP25 (ribonuclease P/MRP 25kDa subunit)

Identity

Alias_namesribonuclease P 25kDa subunit
ribonuclease P/MRP 25kDa subunit
Alias_symbol (synonym)FLJ20374
Other alias-
HGNC (Hugo) RPP25
LocusID (NCBI) 54913
Atlas_Id 72843
Location 15q24.2  [Link to chromosome band 15q24]
Location_base_pair Starts at 75247443 and ends at 75249775 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RPP25   30361
Cards
Entrez_Gene (NCBI)RPP25  54913  ribonuclease P/MRP 25kDa subunit
Aliases
GeneCards (Weizmann)RPP25
Ensembl hg19 (Hinxton) [Gene_View]  chr15:75247443-75249775 [Contig_View]  RPP25 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr15:75247443-75249775 [Contig_View]  RPP25 [Vega]
TCGA cBioPortalRPP25
AceView (NCBI)RPP25
Genatlas (Paris)RPP25
WikiGenes54913
SOURCE (Princeton)RPP25
Genetics Home Reference (NIH)RPP25
Genomic and cartography
GoldenPath hg19 (UCSC)RPP25  -     chr15:75247443-75249775 -  15q24.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)RPP25  -     15q24.2   [Description]    (hg38-Dec_2013)
EnsemblRPP25 - 15q24.2 [CytoView hg19]  RPP25 - 15q24.2 [CytoView hg38]
Mapping of homologs : NCBIRPP25 [Mapview hg19]  RPP25 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK000381 AY034074 BC002497 BC007270 BE254727
RefSeq transcript (Entrez)NM_017793
RefSeq genomic (Entrez)NC_000015 NC_018926 NT_010194 NW_004929398
Consensus coding sequences : CCDS (NCBI)RPP25
Cluster EST : UnigeneHs.8562 [ NCBI ]
CGAP (NCI)Hs.8562
Gene ExpressionRPP25 [ NCBI-GEO ]   RPP25 [ EBI - ARRAY_EXPRESS ]   RPP25 [ SEEK ]   RPP25 [ MEM ]
Gene Expression Viewer (FireBrowse)RPP25 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)54913
GTEX Portal (Tissue expression)RPP25
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BUL9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BUL9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BUL9
Splice isoforms : SwissVarQ9BUL9
PhosPhoSitePlusQ9BUL9
Domains : Interpro (EBI)DNA/RNA-bd_Alba-like   
Domain families : Pfam (Sanger)Alba (PF01918)   
Domain families : Pfam (NCBI)pfam01918   
Conserved Domain (NCBI)RPP25
DMDM Disease mutations54913
Blocks (Seattle)RPP25
SuperfamilyQ9BUL9
Peptide AtlasQ9BUL9
HPRD15276
IPIIPI00306056   
Protein Interaction databases
DIP (DOE-UCLA)Q9BUL9
IntAct (EBI)Q9BUL9
BioGRIDRPP25
STRING (EMBL)RPP25
ZODIACRPP25
Ontologies - Pathways
QuickGOQ9BUL9
Ontology : AmiGOribonuclease P activity  protein binding  nucleoplasm  microtubule organizing center  tRNA processing  poly(A) RNA binding  RNA phosphodiester bond hydrolysis, endonucleolytic  
Ontology : EGO-EBIribonuclease P activity  protein binding  nucleoplasm  microtubule organizing center  tRNA processing  poly(A) RNA binding  RNA phosphodiester bond hydrolysis, endonucleolytic  
Pathways : KEGGRibosome biogenesis in eukaryotes    RNA transport   
NDEx NetworkRPP25
Atlas of Cancer Signalling NetworkRPP25
Wikipedia pathwaysRPP25
Orthology - Evolution
OrthoDB54913
Phylogenetic Trees/Animal Genes : TreeFamRPP25
HOVERGENQ9BUL9
HOGENOMQ9BUL9
Homologs : HomoloGeneRPP25
Homology/Alignments : Family Browser (UCSC)RPP25
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRPP25 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RPP25
dbVarRPP25
ClinVarRPP25
1000_GenomesRPP25 
Exome Variant ServerRPP25
ExAC (Exome Aggregation Consortium)RPP25 (select the gene name)
Genetic variants : HAPMAP54913
Genomic Variants (DGV)RPP25 [DGVbeta]
DECIPHER (Syndromes)15:75247443-75249775  
CONAN: Copy Number AnalysisRPP25 
Mutations
ICGC Data PortalRPP25 
TCGA Data PortalRPP25 
Broad Tumor PortalRPP25
OASIS PortalRPP25 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRPP25  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRPP25
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RPP25
DgiDB (Drug Gene Interaction Database)RPP25
DoCM (Curated mutations)RPP25 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RPP25 (select a term)
intoGenRPP25
Cancer3DRPP25(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenRPP25
Genetic Testing Registry RPP25
NextProtQ9BUL9 [Medical]
TSGene54913
GENETestsRPP25
Huge Navigator RPP25 [HugePedia]
snp3D : Map Gene to Disease54913
BioCentury BCIQRPP25
ClinGenRPP25
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD54913
Chemical/Pharm GKB GenePA134990737
Clinical trialRPP25
Miscellaneous
canSAR (ICR)RPP25 (select the gene name)
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRPP25
EVEXRPP25
GoPubMedRPP25
iHOPRPP25
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 12:41:49 CET 2017

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