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RPS16P5 (ribosomal protein S16 pseudogene 5)

Identity

Alias (NCBI)RPS16_3_702
HGNC (Hugo) RPS16P5
LocusID (NCBI) 647190
Atlas_Id 72857
Location 6p12.1  [Link to chromosome band 6p12]
Location_base_pair Starts at 53334460 and ends at 53337617 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)RPS16P5   36183
Cards
Entrez_Gene (NCBI)RPS16P5    ribosomal protein S16 pseudogene 5
AliasesRPS16_3_702
GeneCards (Weizmann)RPS16P5
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:53334460-53337617 [Contig_View]  RPS16P5 [Vega]
TCGA cBioPortalRPS16P5
AceView (NCBI)RPS16P5
Genatlas (Paris)RPS16P5
SOURCE (Princeton)RPS16P5
Genetics Home Reference (NIH)RPS16P5
Genomic and cartography
GoldenPath hg38 (UCSC)RPS16P5  -     chr6:53334460-53337617 -  6p12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RPS16P5  -     6p12.1   [Description]    (hg19-Feb_2009)
GoldenPathRPS16P5 - 6p12.1 [CytoView hg19]  RPS16P5 - 6p12.1 [CytoView hg38]
genome Data Viewer NCBIRPS16P5 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK097937
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RPS16P5
Gene ExpressionRPS16P5 [ NCBI-GEO ]   RPS16P5 [ EBI - ARRAY_EXPRESS ]   RPS16P5 [ SEEK ]   RPS16P5 [ MEM ]
Gene Expression Viewer (FireBrowse)RPS16P5 [ Firebrowse - Broad ]
GenevisibleExpression of RPS16P5 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)647190
GTEX Portal (Tissue expression)RPS16P5
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RPS16P5
Blocks (Seattle)RPS16P5
IPIIPI00747698   
Protein Interaction databases
BioGRIDRPS16P5
STRING (EMBL)RPS16P5
ZODIACRPS16P5
Ontologies - Pathways
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRPS16P5
EVEXRPS16P5
GoPubMedRPS16P5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 17:25:37 CET 2020

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