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RPS16P5 (ribosomal protein S16 pseudogene 5)

Identity

Other aliasRPS16_3_702
HGNC (Hugo) RPS16P5
LocusID (NCBI) 647190
Atlas_Id 72857
Location 6p12.1  [Link to chromosome band 6p12]
Location_base_pair Starts at 53334460 and ends at 53337617 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RPS16P5   36183
Cards
Entrez_Gene (NCBI)RPS16P5  647190  ribosomal protein S16 pseudogene 5
AliasesRPS16_3_702
GeneCards (Weizmann)RPS16P5
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:53334460-53337617 [Contig_View]  RPS16P5 [Vega]
TCGA cBioPortalRPS16P5
AceView (NCBI)RPS16P5
Genatlas (Paris)RPS16P5
WikiGenes647190
SOURCE (Princeton)RPS16P5
Genetics Home Reference (NIH)RPS16P5
Genomic and cartography
GoldenPath hg38 (UCSC)RPS16P5  -     chr6:53334460-53337617 -  6p12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RPS16P5  -     6p12.1   [Description]    (hg19-Feb_2009)
EnsemblRPS16P5 - 6p12.1 [CytoView hg19]  RPS16P5 - 6p12.1 [CytoView hg38]
Mapping of homologs : NCBIRPS16P5 [Mapview hg19]  RPS16P5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK097937
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RPS16P5
Cluster EST : UnigeneHs.520189 [ NCBI ]
CGAP (NCI)Hs.520189
Gene ExpressionRPS16P5 [ NCBI-GEO ]   RPS16P5 [ EBI - ARRAY_EXPRESS ]   RPS16P5 [ SEEK ]   RPS16P5 [ MEM ]
Gene Expression Viewer (FireBrowse)RPS16P5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)647190
GTEX Portal (Tissue expression)RPS16P5
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RPS16P5
DMDM Disease mutations647190
Blocks (Seattle)RPS16P5
IPIIPI00747698   
Protein Interaction databases
BioGRIDRPS16P5
STRING (EMBL)RPS16P5
ZODIACRPS16P5
Ontologies - Pathways
Huge Navigator RPS16P5 [HugePedia]
snp3D : Map Gene to Disease647190
BioCentury BCIQRPS16P5
ClinGenRPS16P5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD647190
Clinical trialRPS16P5
Miscellaneous
canSAR (ICR)RPS16P5 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRPS16P5
EVEXRPS16P5
GoPubMedRPS16P5
iHOPRPS16P5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:27:36 CEST 2018

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