Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

RPS6P6 (ribosomal protein S6 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 728131
Atlas_Id 72874
Location 4q21.22  [Link to chromosome band 4q21]
Location_base_pair Starts at 82494801 and ends at 82496278 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)RPS6P6  728131  ribosomal protein S6 pseudogene
Aliases
GeneCards (Weizmann)RPS6P6
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr4:82494801-82496278 [Contig_View]  RPS6P6 [Vega]
TCGA cBioPortalRPS6P6
AceView (NCBI)RPS6P6
Genatlas (Paris)RPS6P6
WikiGenes728131
SOURCE (Princeton)RPS6P6
Genetics Home Reference (NIH)RPS6P6
Genomic and cartography
GoldenPath hg38 (UCSC)RPS6P6  -     chr4:82494801-82496278 -  4q21.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RPS6P6  -     4q21.22   [Description]    (hg19-Feb_2009)
EnsemblRPS6P6 - 4q21.22 [CytoView hg19]  RPS6P6 - 4q21.22 [CytoView hg38]
Mapping of homologs : NCBIRPS6P6 [Mapview hg19]  RPS6P6 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC052613
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RPS6P6
Cluster EST : UnigeneHs.507676 [ NCBI ]
CGAP (NCI)Hs.507676
Gene ExpressionRPS6P6 [ NCBI-GEO ]   RPS6P6 [ EBI - ARRAY_EXPRESS ]   RPS6P6 [ SEEK ]   RPS6P6 [ MEM ]
Gene Expression Viewer (FireBrowse)RPS6P6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)728131
GTEX Portal (Tissue expression)RPS6P6
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RPS6P6
DMDM Disease mutations728131
Blocks (Seattle)RPS6P6
Protein Interaction databases
BioGRIDRPS6P6
STRING (EMBL)RPS6P6
ZODIACRPS6P6
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease728131
BioCentury BCIQRPS6P6
ClinGenRPS6P6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728131
Clinical trialRPS6P6
Miscellaneous
canSAR (ICR)RPS6P6 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRPS6P6
EVEXRPS6P6
GoPubMedRPS6P6
iHOPRPS6P6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:25:56 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.