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RPSAP41 (ribosomal protein SA pseudogene 41)

Identity

Other aliasRPSA_17_711
HGNC (Hugo) RPSAP41
LocusID (NCBI) 100270918
Atlas_Id 76843
Location 6q13  [Link to chromosome band 6q13]
Location_base_pair Starts at 73268051 and ends at 73291338 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)RPSAP41   36663
Cards
Entrez_Gene (NCBI)RPSAP41  100270918  ribosomal protein SA pseudogene 41
AliasesRPSA_17_711
GeneCards (Weizmann)RPSAP41
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:73268051-73291338 [Contig_View]  RPSAP41 [Vega]
TCGA cBioPortalRPSAP41
AceView (NCBI)RPSAP41
Genatlas (Paris)RPSAP41
WikiGenes100270918
SOURCE (Princeton)RPSAP41
Genetics Home Reference (NIH)RPSAP41
Genomic and cartography
GoldenPath hg38 (UCSC)RPSAP41  -     chr6:73268051-73291338 +  6q13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RPSAP41  -     6q13   [Description]    (hg19-Feb_2009)
EnsemblRPSAP41 - 6q13 [CytoView hg19]  RPSAP41 - 6q13 [CytoView hg38]
Mapping of homologs : NCBIRPSAP41 [Mapview hg19]  RPSAP41 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL832252
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RPSAP41
Cluster EST : UnigeneHs.661304 [ NCBI ]
CGAP (NCI)Hs.661304
Gene ExpressionRPSAP41 [ NCBI-GEO ]   RPSAP41 [ EBI - ARRAY_EXPRESS ]   RPSAP41 [ SEEK ]   RPSAP41 [ MEM ]
Gene Expression Viewer (FireBrowse)RPSAP41 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100270918
GTEX Portal (Tissue expression)RPSAP41
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RPSAP41
DMDM Disease mutations100270918
Blocks (Seattle)RPSAP41
Protein Interaction databases
BioGRIDRPSAP41
STRING (EMBL)RPSAP41
ZODIACRPSAP41
Ontologies - Pathways
Huge Navigator RPSAP41 [HugePedia]
snp3D : Map Gene to Disease100270918
BioCentury BCIQRPSAP41
ClinGenRPSAP41
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100270918
Clinical trialRPSAP41
Miscellaneous
canSAR (ICR)RPSAP41 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRPSAP41
EVEXRPSAP41
GoPubMedRPSAP41
iHOPRPSAP41
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:27:41 CEST 2018

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