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RPSAP52 (ribosomal protein SA pseudogene 52)

Identity

Alias (NCBI)RPSA_17_1251
HGNC (Hugo) RPSAP52
LocusID (NCBI) 204010
Atlas_Id 53039
Location 12q14.3  [Link to chromosome band 12q14]
Location_base_pair Starts at 65758021 and ends at 65826974 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
EBF1 (5q33.3) / RPSAP52 (12q14.3)RAD51B (14q24.1) / RPSAP52 (12q14.3)RPSAP52 (12q14.3) / ALDH2 (12q24.12)
RPSAP52 (12q14.3) / COG5 (7q22.3)RPSAP52 (12q14.3) / EBF1 (5q33.3)RPSAP52 (12q14.3) / ELAC2 (17p12)
RPSAP52 (12q14.3) / WIF1 (12q14.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)RPSAP52   35752
Cards
Entrez_Gene (NCBI)RPSAP52    ribosomal protein SA pseudogene 52
AliasesRPSA_17_1251
GeneCards (Weizmann)RPSAP52
Ensembl hg19 (Hinxton)ENSG00000241749 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000241749 [Gene_View]  ENSG00000241749 [Sequence]  chr12:65758021-65826974 [Contig_View]  RPSAP52 [Vega]
ICGC DataPortalENSG00000241749
TCGA cBioPortalRPSAP52
AceView (NCBI)RPSAP52
Genatlas (Paris)RPSAP52
SOURCE (Princeton)RPSAP52
Genetics Home Reference (NIH)RPSAP52
Genomic and cartography
GoldenPath hg38 (UCSC)RPSAP52  -     chr12:65758021-65826974 -  12q14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RPSAP52  -     12q14.3   [Description]    (hg19-Feb_2009)
GoldenPathRPSAP52 - 12q14.3 [CytoView hg19]  RPSAP52 - 12q14.3 [CytoView hg38]
ImmunoBaseENSG00000241749
Genome Data Viewer NCBIRPSAP52 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC058822 BC107865
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)RPSAP52
Gene ExpressionRPSAP52 [ NCBI-GEO ]   RPSAP52 [ EBI - ARRAY_EXPRESS ]   RPSAP52 [ SEEK ]   RPSAP52 [ MEM ]
Gene Expression Viewer (FireBrowse)RPSAP52 [ Firebrowse - Broad ]
GenevisibleExpression of RPSAP52 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)204010
GTEX Portal (Tissue expression)RPSAP52
Human Protein AtlasENSG00000241749-RPSAP52 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RPSAP52
Human Protein Atlas [tissue]ENSG00000241749-RPSAP52 [tissue]
Protein Interaction databases
BioGRIDRPSAP52
STRING (EMBL)RPSAP52
ZODIACRPSAP52
Ontologies - Pathways
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXRPSAP52
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:29:42 CEST 2021

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