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RPSAP58 (ribosomal protein SA pseudogene 58)

Identity

Alias (NCBI)RPSA_30_1642
HGNC (Hugo) RPSAP58
LocusID (NCBI) 388524
Atlas_Id 72878
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 23763004 and ends at 23828117 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)RPSAP58   36809
Cards
Entrez_Gene (NCBI)RPSAP58    ribosomal protein SA pseudogene 58
AliasesRPSA_30_1642
GeneCards (Weizmann)RPSAP58
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr19:23763004-23828117 [Contig_View]  RPSAP58 [Vega]
TCGA cBioPortalRPSAP58
AceView (NCBI)RPSAP58
Genatlas (Paris)RPSAP58
SOURCE (Princeton)RPSAP58
Genetics Home Reference (NIH)RPSAP58
Genomic and cartography
GoldenPath hg38 (UCSC)RPSAP58  -     chr19:23763004-23828117 +  19p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RPSAP58  -     19p12   [Description]    (hg19-Feb_2009)
GoldenPathRPSAP58 - 19p12 [CytoView hg19]  RPSAP58 - 19p12 [CytoView hg38]
Genome Data Viewer NCBIRPSAP58 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC071971 OA986985
RefSeq transcript (Entrez)NM_001005472 NM_001355283 NM_001355287 NM_001387845 NM_001387846
Consensus coding sequences : CCDS (NCBI)RPSAP58
Gene ExpressionRPSAP58 [ NCBI-GEO ]   RPSAP58 [ EBI - ARRAY_EXPRESS ]   RPSAP58 [ SEEK ]   RPSAP58 [ MEM ]
Gene Expression Viewer (FireBrowse)RPSAP58 [ Firebrowse - Broad ]
GenevisibleExpression of RPSAP58 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)388524
GTEX Portal (Tissue expression)RPSAP58
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RPSAP58
HPRD14203
Protein Interaction databases
BioGRIDRPSAP58
STRING (EMBL)RPSAP58
ZODIACRPSAP58
Ontologies - Pathways
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXRPSAP58
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jan 20 13:49:14 CET 2022

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