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RPSAP58 (ribosomal protein SA pseudogene 58)

Identity

Other aliasRPSA_30_1642
HGNC (Hugo) RPSAP58
LocusID (NCBI) 388524
Atlas_Id 72878
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 23945816 and ends at 24010919 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RPSAP58   36809
Cards
Entrez_Gene (NCBI)RPSAP58  388524  ribosomal protein SA pseudogene 58
AliasesRPSA_30_1642
GeneCards (Weizmann)RPSAP58
Ensembl hg19 (Hinxton)ENSG00000205246 [Gene_View]  chr19:23945816-24010919 [Contig_View]  RPSAP58 [Vega]
Ensembl hg38 (Hinxton)ENSG00000205246 [Gene_View]  chr19:23945816-24010919 [Contig_View]  RPSAP58 [Vega]
ICGC DataPortalENSG00000205246
TCGA cBioPortalRPSAP58
AceView (NCBI)RPSAP58
Genatlas (Paris)RPSAP58
WikiGenes388524
SOURCE (Princeton)RPSAP58
Genetics Home Reference (NIH)RPSAP58
Genomic and cartography
GoldenPath hg19 (UCSC)RPSAP58  -     chr19:23945816-24010919 +  19p12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)RPSAP58  -     19p12   [Description]    (hg38-Dec_2013)
EnsemblRPSAP58 - 19p12 [CytoView hg19]  RPSAP58 - 19p12 [CytoView hg38]
Mapping of homologs : NCBIRPSAP58 [Mapview hg19]  RPSAP58 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC071971 DQ585311
RefSeq transcript (Entrez)NM_001005472
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011295 NW_004929414
Consensus coding sequences : CCDS (NCBI)RPSAP58
Cluster EST : UnigeneHs.560655 [ NCBI ]
CGAP (NCI)Hs.560655
Alternative Splicing GalleryENSG00000205246
Gene ExpressionRPSAP58 [ NCBI-GEO ]   RPSAP58 [ EBI - ARRAY_EXPRESS ]   RPSAP58 [ SEEK ]   RPSAP58 [ MEM ]
Gene Expression Viewer (FireBrowse)RPSAP58 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)388524
GTEX Portal (Tissue expression)RPSAP58
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RPSAP58
DMDM Disease mutations388524
Blocks (Seattle)RPSAP58
Human Protein AtlasENSG00000205246
HPRD14203
IPIIPI00847766   
Protein Interaction databases
FunCoupENSG00000205246
BioGRIDRPSAP58
STRING (EMBL)RPSAP58
ZODIACRPSAP58
Ontologies - Pathways
Huge Navigator RPSAP58 [HugePedia]
snp3D : Map Gene to Disease388524
BioCentury BCIQRPSAP58
ClinGenRPSAP58
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD388524
Clinical trialRPSAP58
Miscellaneous
canSAR (ICR)RPSAP58 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRPSAP58
EVEXRPSAP58
GoPubMedRPSAP58
iHOPRPSAP58
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:41:58 CET 2017

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