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RRAD (Ras-related associated with diabetes)

Identity

Alias_namesRas-related associated with diabetes
RRAD, Ras related glycolysis inihibitor and calcium channel regulator
Alias_symbol (synonym)REM3
RAD
Other aliasRAD1
HGNC (Hugo) RRAD
LocusID (NCBI) 6236
Atlas_Id 277
Location 16q22.1  [Link to chromosome band 16q22]
Location_base_pair Starts at 66955582 and ends at 66959439 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RRAD   10446
Cards
Entrez_Gene (NCBI)RRAD  6236  Ras-related associated with diabetes
AliasesRAD; RAD1; REM3
GeneCards (Weizmann)RRAD
Ensembl hg19 (Hinxton)ENSG00000166592 [Gene_View]  chr16:66955582-66959439 [Contig_View]  RRAD [Vega]
Ensembl hg38 (Hinxton)ENSG00000166592 [Gene_View]  chr16:66955582-66959439 [Contig_View]  RRAD [Vega]
ICGC DataPortalENSG00000166592
TCGA cBioPortalRRAD
AceView (NCBI)RRAD
Genatlas (Paris)RRAD
WikiGenes6236
SOURCE (Princeton)RRAD
Genetics Home Reference (NIH)RRAD
Genomic and cartography
GoldenPath hg19 (UCSC)RRAD  -     chr16:66955582-66959439 -  16q22.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)RRAD  -     16q22.1   [Description]    (hg38-Dec_2013)
EnsemblRRAD - 16q22.1 [CytoView hg19]  RRAD - 16q22.1 [CytoView hg38]
Mapping of homologs : NCBIRRAD [Mapview hg19]  RRAD [Mapview hg38]
OMIM179503   
Gene and transcription
Genbank (Entrez)AK290613 BC011645 BC057815 BP257026 DQ891951
RefSeq transcript (Entrez)NM_001128850 NM_004165
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_010498 NW_004929402
Consensus coding sequences : CCDS (NCBI)RRAD
Cluster EST : UnigeneHs.1027 [ NCBI ]
CGAP (NCI)Hs.1027
Alternative Splicing GalleryENSG00000166592
Gene ExpressionRRAD [ NCBI-GEO ]   RRAD [ EBI - ARRAY_EXPRESS ]   RRAD [ SEEK ]   RRAD [ MEM ]
Gene Expression Viewer (FireBrowse)RRAD [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6236
GTEX Portal (Tissue expression)RRAD
Protein : pattern, domain, 3D structure
UniProt/SwissProtP55042   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP55042  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP55042
Splice isoforms : SwissVarP55042
PhosPhoSitePlusP55042
Domaine pattern : Prosite (Expaxy)RAS (PS51421)   
Domains : Interpro (EBI)P-loop_NTPase    RRAD    Small_GTP-bd_dom    Small_GTPase    Small_GTPase_GEM/REM/Rad    Small_GTPase_Ras   
Domain families : Pfam (Sanger)Ras (PF00071)   
Domain families : Pfam (NCBI)pfam00071   
Conserved Domain (NCBI)RRAD
DMDM Disease mutations6236
Blocks (Seattle)RRAD
PDB (SRS)2DPX    2GJS    3Q72    3Q7P    3Q7Q   
PDB (PDBSum)2DPX    2GJS    3Q72    3Q7P    3Q7Q   
PDB (IMB)2DPX    2GJS    3Q72    3Q7P    3Q7Q   
PDB (RSDB)2DPX    2GJS    3Q72    3Q7P    3Q7Q   
Structural Biology KnowledgeBase2DPX    2GJS    3Q72    3Q7P    3Q7Q   
SCOP (Structural Classification of Proteins)2DPX    2GJS    3Q72    3Q7P    3Q7Q   
CATH (Classification of proteins structures)2DPX    2GJS    3Q72    3Q7P    3Q7Q   
SuperfamilyP55042
Human Protein AtlasENSG00000166592
Peptide AtlasP55042
HPRD01536
IPIIPI00375333   
Protein Interaction databases
DIP (DOE-UCLA)P55042
IntAct (EBI)P55042
FunCoupENSG00000166592
BioGRIDRRAD
STRING (EMBL)RRAD
ZODIACRRAD
Ontologies - Pathways
QuickGOP55042
Ontology : AmiGOGTPase activity  protein binding  calmodulin binding  GTP binding  intracellular  intracellular  plasma membrane  small GTPase mediated signal transduction  protein transport  negative regulation of cell growth  
Ontology : EGO-EBIGTPase activity  protein binding  calmodulin binding  GTP binding  intracellular  intracellular  plasma membrane  small GTPase mediated signal transduction  protein transport  negative regulation of cell growth  
NDEx NetworkRRAD
Atlas of Cancer Signalling NetworkRRAD
Wikipedia pathwaysRRAD
Orthology - Evolution
OrthoDB6236
GeneTree (enSembl)ENSG00000166592
Phylogenetic Trees/Animal Genes : TreeFamRRAD
HOVERGENP55042
HOGENOMP55042
Homologs : HomoloGeneRRAD
Homology/Alignments : Family Browser (UCSC)RRAD
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRRAD [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RRAD
dbVarRRAD
ClinVarRRAD
1000_GenomesRRAD 
Exome Variant ServerRRAD
ExAC (Exome Aggregation Consortium)RRAD (select the gene name)
Genetic variants : HAPMAP6236
Genomic Variants (DGV)RRAD [DGVbeta]
DECIPHER (Syndromes)16:66955582-66959439  ENSG00000166592
CONAN: Copy Number AnalysisRRAD 
Mutations
ICGC Data PortalRRAD 
TCGA Data PortalRRAD 
Broad Tumor PortalRRAD
OASIS PortalRRAD [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRRAD  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRRAD
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RRAD
DgiDB (Drug Gene Interaction Database)RRAD
DoCM (Curated mutations)RRAD (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RRAD (select a term)
intoGenRRAD
Cancer3DRRAD(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM179503   
Orphanet
MedgenRRAD
Genetic Testing Registry RRAD
NextProtP55042 [Medical]
TSGene6236
GENETestsRRAD
Huge Navigator RRAD [HugePedia]
snp3D : Map Gene to Disease6236
BioCentury BCIQRRAD
ClinGenRRAD
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD6236
Chemical/Pharm GKB GenePA34860
Clinical trialRRAD
Miscellaneous
canSAR (ICR)RRAD (select the gene name)
Probes
Litterature
PubMed34 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRRAD
EVEXRRAD
GoPubMedRRAD
iHOPRRAD
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:25:49 CET 2017

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