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RSG1 (REM2 and RAB like small GTPase 1)

Identity

Alias_namesC1orf89
chromosome 1 open reading frame 89
REM2 and RAB-like small GTPase 1
Alias_symbol (synonym)MGC10731
Other alias
HGNC (Hugo) RSG1
LocusID (NCBI) 79363
Atlas_Id 56134
Location 1p36.13  [Link to chromosome band 1p36]
Location_base_pair Starts at 16558182 and ends at 16563659 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RSG1   28127
Cards
Entrez_Gene (NCBI)RSG1  79363  REM2 and RAB like small GTPase 1
AliasesC1orf89
GeneCards (Weizmann)RSG1
Ensembl hg19 (Hinxton)ENSG00000132881 [Gene_View]  chr1:16558182-16563659 [Contig_View]  RSG1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000132881 [Gene_View]  chr1:16558182-16563659 [Contig_View]  RSG1 [Vega]
ICGC DataPortalENSG00000132881
TCGA cBioPortalRSG1
AceView (NCBI)RSG1
Genatlas (Paris)RSG1
WikiGenes79363
SOURCE (Princeton)RSG1
Genetics Home Reference (NIH)RSG1
Genomic and cartography
GoldenPath hg19 (UCSC)RSG1  -     chr1:16558182-16563659 -  1p36.13   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)RSG1  -     1p36.13   [Description]    (hg38-Dec_2013)
EnsemblRSG1 - 1p36.13 [CytoView hg19]  RSG1 - 1p36.13 [CytoView hg38]
Mapping of homologs : NCBIRSG1 [Mapview hg19]  RSG1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_030907
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RSG1
Cluster EST : UnigeneHs.546430 [ NCBI ]
CGAP (NCI)Hs.546430
Alternative Splicing GalleryENSG00000132881
Gene ExpressionRSG1 [ NCBI-GEO ]   RSG1 [ EBI - ARRAY_EXPRESS ]   RSG1 [ SEEK ]   RSG1 [ MEM ]
Gene Expression Viewer (FireBrowse)RSG1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79363
GTEX Portal (Tissue expression)RSG1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BU20   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BU20  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BU20
Splice isoforms : SwissVarQ9BU20
PhosPhoSitePlusQ9BU20
Domains : Interpro (EBI)P-loop_NTPase    Small_GTPase   
Domain families : Pfam (Sanger)Ras (PF00071)   
Domain families : Pfam (NCBI)pfam00071   
Conserved Domain (NCBI)RSG1
DMDM Disease mutations79363
Blocks (Seattle)RSG1
SuperfamilyQ9BU20
Human Protein AtlasENSG00000132881
Peptide AtlasQ9BU20
HPRD14399
IPIIPI00008416   IPI00748032   
Protein Interaction databases
DIP (DOE-UCLA)Q9BU20
IntAct (EBI)Q9BU20
FunCoupENSG00000132881
BioGRIDRSG1
STRING (EMBL)RSG1
ZODIACRSG1
Ontologies - Pathways
QuickGOQ9BU20
Ontology : AmiGOGTP binding  nucleoplasm  cytoplasm  exocytosis  small GTPase mediated signal transduction  protein transport  regulation of exocytosis  regulation of vesicle fusion  cellular protein localization  ciliary basal body  cilium assembly  
Ontology : EGO-EBIGTP binding  nucleoplasm  cytoplasm  exocytosis  small GTPase mediated signal transduction  protein transport  regulation of exocytosis  regulation of vesicle fusion  cellular protein localization  ciliary basal body  cilium assembly  
NDEx NetworkRSG1
Atlas of Cancer Signalling NetworkRSG1
Wikipedia pathwaysRSG1
Orthology - Evolution
OrthoDB79363
GeneTree (enSembl)ENSG00000132881
Phylogenetic Trees/Animal Genes : TreeFamRSG1
HOVERGENQ9BU20
HOGENOMQ9BU20
Homologs : HomoloGeneRSG1
Homology/Alignments : Family Browser (UCSC)RSG1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRSG1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RSG1
dbVarRSG1
ClinVarRSG1
1000_GenomesRSG1 
Exome Variant ServerRSG1
ExAC (Exome Aggregation Consortium)RSG1 (select the gene name)
Genetic variants : HAPMAP79363
Genomic Variants (DGV)RSG1 [DGVbeta]
DECIPHER (Syndromes)1:16558182-16563659  ENSG00000132881
CONAN: Copy Number AnalysisRSG1 
Mutations
ICGC Data PortalRSG1 
TCGA Data PortalRSG1 
Broad Tumor PortalRSG1
OASIS PortalRSG1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRSG1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRSG1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RSG1
DgiDB (Drug Gene Interaction Database)RSG1
DoCM (Curated mutations)RSG1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RSG1 (select a term)
intoGenRSG1
Cancer3DRSG1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenRSG1
Genetic Testing Registry RSG1
NextProtQ9BU20 [Medical]
TSGene79363
GENETestsRSG1
Huge Navigator RSG1 [HugePedia]
snp3D : Map Gene to Disease79363
BioCentury BCIQRSG1
ClinGenRSG1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79363
Chemical/Pharm GKB GenePA142672473
Clinical trialRSG1
Miscellaneous
canSAR (ICR)RSG1 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRSG1
EVEXRSG1
GoPubMedRSG1
iHOPRSG1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:18:06 CEST 2017

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