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RSPH10B (radial spoke head 10 homolog B)

Identity

Alias_namesradial spoke head 10 homolog B (Chlamydomonas)
Other alias-
HGNC (Hugo) RSPH10B
LocusID (NCBI) 222967
Atlas_Id 72907
Location 7p22.1  [Link to chromosome band 7p22]
Location_base_pair Starts at 5926146 and ends at 5970683 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RSPH10B   27362
Cards
Entrez_Gene (NCBI)RSPH10B  222967  radial spoke head 10 homolog B
Aliases
GeneCards (Weizmann)RSPH10B
Ensembl hg19 (Hinxton)ENSG00000155026 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000155026 [Gene_View]  chr7:5926146-5970683 [Contig_View]  RSPH10B [Vega]
ICGC DataPortalENSG00000155026
TCGA cBioPortalRSPH10B
AceView (NCBI)RSPH10B
Genatlas (Paris)RSPH10B
WikiGenes222967
SOURCE (Princeton)RSPH10B
Genetics Home Reference (NIH)RSPH10B
Genomic and cartography
GoldenPath hg38 (UCSC)RSPH10B  -     chr7:5926146-5970683 -  7p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RSPH10B  -     7p22.1   [Description]    (hg19-Feb_2009)
EnsemblRSPH10B - 7p22.1 [CytoView hg19]  RSPH10B - 7p22.1 [CytoView hg38]
Mapping of homologs : NCBIRSPH10B [Mapview hg19]  RSPH10B [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC034495 BC157864 BC157871
RefSeq transcript (Entrez)NM_173565
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RSPH10B
Cluster EST : UnigeneHs.442339 [ NCBI ]
CGAP (NCI)Hs.442339
Alternative Splicing GalleryENSG00000155026
Gene ExpressionRSPH10B [ NCBI-GEO ]   RSPH10B [ EBI - ARRAY_EXPRESS ]   RSPH10B [ SEEK ]   RSPH10B [ MEM ]
Gene Expression Viewer (FireBrowse)RSPH10B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)222967
GTEX Portal (Tissue expression)RSPH10B
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0C881   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0C881  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0C881
Splice isoforms : SwissVarP0C881
PhosPhoSitePlusP0C881
Domains : Interpro (EBI)MORN   
Domain families : Pfam (Sanger)MORN (PF02493)   
Domain families : Pfam (NCBI)pfam02493   
Domain families : Smart (EMBL)MORN (SM00698)  
Conserved Domain (NCBI)RSPH10B
DMDM Disease mutations222967
Blocks (Seattle)RSPH10B
SuperfamilyP0C881
Human Protein AtlasENSG00000155026
Peptide AtlasP0C881
HPRD11249
IPIIPI00855921   IPI00477879   IPI00168608   IPI01011347   IPI01009545   IPI00893360   IPI00893496   IPI01012664   IPI00893502   
Protein Interaction databases
DIP (DOE-UCLA)P0C881
IntAct (EBI)P0C881
FunCoupENSG00000155026
BioGRIDRSPH10B
STRING (EMBL)RSPH10B
ZODIACRSPH10B
Ontologies - Pathways
QuickGOP0C881
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkRSPH10B
Atlas of Cancer Signalling NetworkRSPH10B
Wikipedia pathwaysRSPH10B
Orthology - Evolution
OrthoDB222967
GeneTree (enSembl)ENSG00000155026
Phylogenetic Trees/Animal Genes : TreeFamRSPH10B
HOVERGENP0C881
HOGENOMP0C881
Homologs : HomoloGeneRSPH10B
Homology/Alignments : Family Browser (UCSC)RSPH10B
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRSPH10B [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RSPH10B
dbVarRSPH10B
ClinVarRSPH10B
1000_GenomesRSPH10B 
Exome Variant ServerRSPH10B
ExAC (Exome Aggregation Consortium)RSPH10B (select the gene name)
Genetic variants : HAPMAP222967
Genomic Variants (DGV)RSPH10B [DGVbeta]
DECIPHERRSPH10B [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRSPH10B 
Mutations
ICGC Data PortalRSPH10B 
TCGA Data PortalRSPH10B 
Broad Tumor PortalRSPH10B
OASIS PortalRSPH10B [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRSPH10B  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRSPH10B
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RSPH10B
DgiDB (Drug Gene Interaction Database)RSPH10B
DoCM (Curated mutations)RSPH10B (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RSPH10B (select a term)
intoGenRSPH10B
Cancer3DRSPH10B(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenRSPH10B
Genetic Testing Registry RSPH10B
NextProtP0C881 [Medical]
TSGene222967
GENETestsRSPH10B
Target ValidationRSPH10B
Huge Navigator RSPH10B [HugePedia]
snp3D : Map Gene to Disease222967
BioCentury BCIQRSPH10B
ClinGenRSPH10B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD222967
Chemical/Pharm GKB GenePA162402200
Clinical trialRSPH10B
Miscellaneous
canSAR (ICR)RSPH10B (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRSPH10B
EVEXRSPH10B
GoPubMedRSPH10B
iHOPRSPH10B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:39:37 CEST 2017

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