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RSPH10B2 (radial spoke head 10 homolog B2 (Chlamydomonas))

Identity

Alias_namesradial spoke head 10 homolog B2 (Chlamydomonas)
Other alias-
HGNC (Hugo) RSPH10B2
LocusID (NCBI) 728194
Atlas_Id 72908
Location 7p22.1  [Link to chromosome band 7p22]
Location_base_pair Starts at 6793740 and ends at 6838396 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RSPH10B2   34385
Cards
Entrez_Gene (NCBI)RSPH10B2  728194  radial spoke head 10 homolog B2 (Chlamydomonas)
Aliases
GeneCards (Weizmann)RSPH10B2
Ensembl hg19 (Hinxton)ENSG00000169402 [Gene_View]  chr7:6793740-6838396 [Contig_View]  RSPH10B2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000169402 [Gene_View]  chr7:6793740-6838396 [Contig_View]  RSPH10B2 [Vega]
ICGC DataPortalENSG00000169402
TCGA cBioPortalRSPH10B2
AceView (NCBI)RSPH10B2
Genatlas (Paris)RSPH10B2
WikiGenes728194
SOURCE (Princeton)RSPH10B2
Genetics Home Reference (NIH)RSPH10B2
Genomic and cartography
GoldenPath hg19 (UCSC)RSPH10B2  -     chr7:6793740-6838396 +  7p22.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)RSPH10B2  -     7p22.1   [Description]    (hg38-Dec_2013)
EnsemblRSPH10B2 - 7p22.1 [CytoView hg19]  RSPH10B2 - 7p22.1 [CytoView hg38]
Mapping of homologs : NCBIRSPH10B2 [Mapview hg19]  RSPH10B2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK093411 AK294481 AK314983 BC044242
RefSeq transcript (Entrez)NM_001099697
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007819 NW_004929329
Consensus coding sequences : CCDS (NCBI)RSPH10B2
Cluster EST : UnigeneHs.710326 [ NCBI ]
CGAP (NCI)Hs.710326
Alternative Splicing GalleryENSG00000169402
Gene ExpressionRSPH10B2 [ NCBI-GEO ]   RSPH10B2 [ EBI - ARRAY_EXPRESS ]   RSPH10B2 [ SEEK ]   RSPH10B2 [ MEM ]
Gene Expression Viewer (FireBrowse)RSPH10B2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)728194
GTEX Portal (Tissue expression)RSPH10B2
Protein : pattern, domain, 3D structure
UniProt/SwissProtB2RC85   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtB2RC85  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProB2RC85
Splice isoforms : SwissVarB2RC85
PhosPhoSitePlusB2RC85
Domains : Interpro (EBI)MORN   
Domain families : Pfam (Sanger)MORN (PF02493)   
Domain families : Pfam (NCBI)pfam02493   
Domain families : Smart (EMBL)MORN (SM00698)  
Conserved Domain (NCBI)RSPH10B2
DMDM Disease mutations728194
Blocks (Seattle)RSPH10B2
SuperfamilyB2RC85
Human Protein AtlasENSG00000169402
Peptide AtlasB2RC85
Protein Interaction databases
DIP (DOE-UCLA)B2RC85
IntAct (EBI)B2RC85
FunCoupENSG00000169402
BioGRIDRSPH10B2
STRING (EMBL)RSPH10B2
ZODIACRSPH10B2
Ontologies - Pathways
QuickGOB2RC85
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkRSPH10B2
Atlas of Cancer Signalling NetworkRSPH10B2
Wikipedia pathwaysRSPH10B2
Orthology - Evolution
OrthoDB728194
GeneTree (enSembl)ENSG00000169402
Phylogenetic Trees/Animal Genes : TreeFamRSPH10B2
HOVERGENB2RC85
HOGENOMB2RC85
Homologs : HomoloGeneRSPH10B2
Homology/Alignments : Family Browser (UCSC)RSPH10B2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRSPH10B2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RSPH10B2
dbVarRSPH10B2
ClinVarRSPH10B2
1000_GenomesRSPH10B2 
Exome Variant ServerRSPH10B2
ExAC (Exome Aggregation Consortium)RSPH10B2 (select the gene name)
Genetic variants : HAPMAP728194
Genomic Variants (DGV)RSPH10B2 [DGVbeta]
DECIPHER (Syndromes)7:6793740-6838396  ENSG00000169402
CONAN: Copy Number AnalysisRSPH10B2 
Mutations
ICGC Data PortalRSPH10B2 
TCGA Data PortalRSPH10B2 
Broad Tumor PortalRSPH10B2
OASIS PortalRSPH10B2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRSPH10B2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRSPH10B2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RSPH10B2
DgiDB (Drug Gene Interaction Database)RSPH10B2
DoCM (Curated mutations)RSPH10B2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RSPH10B2 (select a term)
intoGenRSPH10B2
Cancer3DRSPH10B2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenRSPH10B2
Genetic Testing Registry RSPH10B2
NextProtB2RC85 [Medical]
TSGene728194
GENETestsRSPH10B2
Huge Navigator RSPH10B2 [HugePedia]
snp3D : Map Gene to Disease728194
BioCentury BCIQRSPH10B2
ClinGenRSPH10B2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728194
Chemical/Pharm GKB GenePA162402247
Clinical trialRSPH10B2
Miscellaneous
canSAR (ICR)RSPH10B2 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRSPH10B2
EVEXRSPH10B2
GoPubMedRSPH10B2
iHOPRSPH10B2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:42:04 CET 2017

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