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RSRC2 (arginine and serine rich coiled-coil 2)

Identity

Alias_namesarginine/serine-rich coiled-coil 2
Alias_symbol (synonym)FLJ11021
Other alias-
HGNC (Hugo) RSRC2
LocusID (NCBI) 65117
Atlas_Id 47629
Location 12q24.31  [Link to chromosome band 12q24]
Location_base_pair Starts at 122504643 and ends at 122527013 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MIER2 (19p13.3) / RSRC2 (12q24.31)RAF1 (3p25.2) / RSRC2 (12q24.31)RSRC2 (12q24.31) / HECTD1 (14q12)
RSRC2 (12q24.31) / NIPBL (5p13.2)RSRC2 (12q24.31) / RSRC2 (12q24.31)RSRC2 (12q24.31) / SBNO1 (12q24.31)
ZCCHC8 (12q24.31) / RSRC2 (12q24.31)RSRC2 12q24.31 / SBNO1 12q24.31ZCCHC8 12q24.31 / RSRC2 12q24.31

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Leukemias implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(12;12)(q24;q24) ZCCHC8/RSRC2


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 3 ]
  RSRC2/SBNO1 (12q24)
ZCCHC8/RSRC2 (12q24)
t(12;19)(q24;p13) MIER2/RSRC2


External links

Nomenclature
HGNC (Hugo)RSRC2   30559
Cards
Entrez_Gene (NCBI)RSRC2  65117  arginine and serine rich coiled-coil 2
Aliases
GeneCards (Weizmann)RSRC2
Ensembl hg19 (Hinxton)ENSG00000111011 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000111011 [Gene_View]  ENSG00000111011 [Sequence]  chr12:122504643-122527013 [Contig_View]  RSRC2 [Vega]
ICGC DataPortalENSG00000111011
TCGA cBioPortalRSRC2
AceView (NCBI)RSRC2
Genatlas (Paris)RSRC2
WikiGenes65117
SOURCE (Princeton)RSRC2
Genetics Home Reference (NIH)RSRC2
Genomic and cartography
GoldenPath hg38 (UCSC)RSRC2  -     chr12:122504643-122527013 -  12q24.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RSRC2  -     12q24.31   [Description]    (hg19-Feb_2009)
EnsemblRSRC2 - 12q24.31 [CytoView hg19]  RSRC2 - 12q24.31 [CytoView hg38]
Mapping of homologs : NCBIRSRC2 [Mapview hg19]  RSRC2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB212664 AF161432 AK001883 AK023985 AK056114
RefSeq transcript (Entrez)NM_023012 NM_198261 NM_198262
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RSRC2
Cluster EST : UnigeneHs.432996 [ NCBI ]
CGAP (NCI)Hs.432996
Alternative Splicing GalleryENSG00000111011
Gene ExpressionRSRC2 [ NCBI-GEO ]   RSRC2 [ EBI - ARRAY_EXPRESS ]   RSRC2 [ SEEK ]   RSRC2 [ MEM ]
Gene Expression Viewer (FireBrowse)RSRC2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)65117
GTEX Portal (Tissue expression)RSRC2
Human Protein AtlasENSG00000111011-RSRC2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7L4I2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7L4I2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7L4I2
Splice isoforms : SwissVarQ7L4I2
PhosPhoSitePlusQ7L4I2
Domains : Interpro (EBI)SMAP_dom   
Domain families : Pfam (Sanger)SMAP (PF15477)   
Domain families : Pfam (NCBI)pfam15477   
Conserved Domain (NCBI)RSRC2
DMDM Disease mutations65117
Blocks (Seattle)RSRC2
SuperfamilyQ7L4I2
Human Protein Atlas [tissue]ENSG00000111011-RSRC2 [tissue]
Peptide AtlasQ7L4I2
HPRD13342
IPIIPI00419791   IPI00848084   IPI00872495   IPI00902855   IPI00792382   IPI01009277   IPI01010627   
Protein Interaction databases
DIP (DOE-UCLA)Q7L4I2
IntAct (EBI)Q7L4I2
FunCoupENSG00000111011
BioGRIDRSRC2
STRING (EMBL)RSRC2
ZODIACRSRC2
Ontologies - Pathways
QuickGOQ7L4I2
Ontology : AmiGORNA binding  
Ontology : EGO-EBIRNA binding  
NDEx NetworkRSRC2
Atlas of Cancer Signalling NetworkRSRC2
Wikipedia pathwaysRSRC2
Orthology - Evolution
OrthoDB65117
GeneTree (enSembl)ENSG00000111011
Phylogenetic Trees/Animal Genes : TreeFamRSRC2
HOVERGENQ7L4I2
HOGENOMQ7L4I2
Homologs : HomoloGeneRSRC2
Homology/Alignments : Family Browser (UCSC)RSRC2
Gene fusions - Rearrangements
Fusion : MitelmanMIER2/RSRC2 [19p13.3/12q24.31]  [t(12;19)(q24;p13)]  
Fusion : MitelmanRSRC2/SBNO1 [12q24.31/12q24.31]  [t(12;12)(q24;q24)]  
Fusion : MitelmanZCCHC8/RSRC2 [12q24.31/12q24.31]  [t(12;12)(q24;q24)]  
Fusion PortalRSRC2 12q24.31 SBNO1 12q24.31 LUAD
Fusion PortalZCCHC8 12q24.31 RSRC2 12q24.31 BLCA BRCA HNSC KIRC LGG
Fusion : QuiverRSRC2
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRSRC2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RSRC2
dbVarRSRC2
ClinVarRSRC2
1000_GenomesRSRC2 
Exome Variant ServerRSRC2
ExAC (Exome Aggregation Consortium)ENSG00000111011
GNOMAD BrowserENSG00000111011
Varsome BrowserRSRC2
Genetic variants : HAPMAP65117
Genomic Variants (DGV)RSRC2 [DGVbeta]
DECIPHERRSRC2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRSRC2 
Mutations
ICGC Data PortalRSRC2 
TCGA Data PortalRSRC2 
Broad Tumor PortalRSRC2
OASIS PortalRSRC2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRSRC2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRSRC2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RSRC2
DgiDB (Drug Gene Interaction Database)RSRC2
DoCM (Curated mutations)RSRC2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RSRC2 (select a term)
intoGenRSRC2
Cancer3DRSRC2(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETRSRC2
MedgenRSRC2
Genetic Testing Registry RSRC2
NextProtQ7L4I2 [Medical]
TSGene65117
GENETestsRSRC2
Target ValidationRSRC2
Huge Navigator RSRC2 [HugePedia]
snp3D : Map Gene to Disease65117
BioCentury BCIQRSRC2
ClinGenRSRC2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD65117
Chemical/Pharm GKB GenePA162402249
Clinical trialRSRC2
Miscellaneous
canSAR (ICR)RSRC2 (select the gene name)
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRSRC2
EVEXRSRC2
GoPubMedRSRC2
iHOPRSRC2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 6 11:36:48 CET 2018

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