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RSRP1 (arginine and serine rich protein 1)

Identity

Alias_namesC1orf63
chromosome 1 open reading frame 63
arginine/serine-rich protein 1
Alias_symbol (synonym)DJ465N24.2.1
Other aliasNPD014
HGNC (Hugo) RSRP1
LocusID (NCBI) 57035
Atlas_Id 55775
Location 1p36.11  [Link to chromosome band 1p36]
Location_base_pair Starts at 25242237 and ends at 25338254 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RSRP1   25234
Cards
Entrez_Gene (NCBI)RSRP1  57035  arginine and serine rich protein 1
AliasesC1orf63; NPD014
GeneCards (Weizmann)RSRP1
Ensembl hg19 (Hinxton)ENSG00000117616 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000117616 [Gene_View]  chr1:25242237-25338254 [Contig_View]  RSRP1 [Vega]
ICGC DataPortalENSG00000117616
TCGA cBioPortalRSRP1
AceView (NCBI)RSRP1
Genatlas (Paris)RSRP1
WikiGenes57035
SOURCE (Princeton)RSRP1
Genetics Home Reference (NIH)RSRP1
Genomic and cartography
GoldenPath hg38 (UCSC)RSRP1  -     chr1:25242237-25338254 -  1p36.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RSRP1  -     1p36.11   [Description]    (hg19-Feb_2009)
EnsemblRSRP1 - 1p36.11 [CytoView hg19]  RSRP1 - 1p36.11 [CytoView hg38]
Mapping of homologs : NCBIRSRP1 [Mapview hg19]  RSRP1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF247168 AF267856 AK027318 AK091825 AK226012
RefSeq transcript (Entrez)NM_001321772 NM_020317
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RSRP1
Cluster EST : UnigeneHs.692443 [ NCBI ]
CGAP (NCI)Hs.692443
Alternative Splicing GalleryENSG00000117616
Gene ExpressionRSRP1 [ NCBI-GEO ]   RSRP1 [ EBI - ARRAY_EXPRESS ]   RSRP1 [ SEEK ]   RSRP1 [ MEM ]
Gene Expression Viewer (FireBrowse)RSRP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57035
GTEX Portal (Tissue expression)RSRP1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BUV0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BUV0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BUV0
Splice isoforms : SwissVarQ9BUV0
PhosPhoSitePlusQ9BUV0
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RSRP1
DMDM Disease mutations57035
Blocks (Seattle)RSRP1
SuperfamilyQ9BUV0
Human Protein AtlasENSG00000117616
Peptide AtlasQ9BUV0
HPRD14835
IPIIPI00550808   IPI00855979   IPI00855719   IPI00909875   IPI01014760   
Protein Interaction databases
DIP (DOE-UCLA)Q9BUV0
IntAct (EBI)Q9BUV0
FunCoupENSG00000117616
BioGRIDRSRP1
STRING (EMBL)RSRP1
ZODIACRSRP1
Ontologies - Pathways
QuickGOQ9BUV0
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkRSRP1
Atlas of Cancer Signalling NetworkRSRP1
Wikipedia pathwaysRSRP1
Orthology - Evolution
OrthoDB57035
GeneTree (enSembl)ENSG00000117616
Phylogenetic Trees/Animal Genes : TreeFamRSRP1
HOVERGENQ9BUV0
HOGENOMQ9BUV0
Homologs : HomoloGeneRSRP1
Homology/Alignments : Family Browser (UCSC)RSRP1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRSRP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RSRP1
dbVarRSRP1
ClinVarRSRP1
1000_GenomesRSRP1 
Exome Variant ServerRSRP1
ExAC (Exome Aggregation Consortium)RSRP1 (select the gene name)
Genetic variants : HAPMAP57035
Genomic Variants (DGV)RSRP1 [DGVbeta]
DECIPHERRSRP1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRSRP1 
Mutations
ICGC Data PortalRSRP1 
TCGA Data PortalRSRP1 
Broad Tumor PortalRSRP1
OASIS PortalRSRP1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDRSRP1
BioMutasearch RSRP1
DgiDB (Drug Gene Interaction Database)RSRP1
DoCM (Curated mutations)RSRP1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RSRP1 (select a term)
intoGenRSRP1
Cancer3DRSRP1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenRSRP1
Genetic Testing Registry RSRP1
NextProtQ9BUV0 [Medical]
TSGene57035
GENETestsRSRP1
Target ValidationRSRP1
Huge Navigator RSRP1 [HugePedia]
snp3D : Map Gene to Disease57035
BioCentury BCIQRSRP1
ClinGenRSRP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57035
Chemical/Pharm GKB GenePA142672513
Clinical trialRSRP1
Miscellaneous
canSAR (ICR)RSRP1 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRSRP1
EVEXRSRP1
GoPubMedRSRP1
iHOPRSRP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:54:06 CEST 2017

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