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RSU1 (Ras suppressor protein 1)

Identity

Alias_symbol (synonym)RSP-1
FLJ31034
Other alias
HGNC (Hugo) RSU1
LocusID (NCBI) 6251
Atlas_Id 42179
Location 10p13  [Link to chromosome band 10p13]
Location_base_pair Starts at 16590618 and ends at 16817454 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
BLCAP (20q11.23) / RSU1 (10p13)PRKCQ (10p15.1) / RSU1 (10p13)RSU1 (10p13) / RNF10 (12q24.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RSU1   10464
Cards
Entrez_Gene (NCBI)RSU1  6251  Ras suppressor protein 1
AliasesRSP-1
GeneCards (Weizmann)RSU1
Ensembl hg19 (Hinxton)ENSG00000148484 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000148484 [Gene_View]  chr10:16590618-16817454 [Contig_View]  RSU1 [Vega]
ICGC DataPortalENSG00000148484
TCGA cBioPortalRSU1
AceView (NCBI)RSU1
Genatlas (Paris)RSU1
WikiGenes6251
SOURCE (Princeton)RSU1
Genetics Home Reference (NIH)RSU1
Genomic and cartography
GoldenPath hg38 (UCSC)RSU1  -     chr10:16590618-16817454 -  10p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RSU1  -     10p13   [Description]    (hg19-Feb_2009)
EnsemblRSU1 - 10p13 [CytoView hg19]  RSU1 - 10p13 [CytoView hg38]
Mapping of homologs : NCBIRSU1 [Mapview hg19]  RSU1 [Mapview hg38]
OMIM179555   
Gene and transcription
Genbank (Entrez)AK023951 AK024109 AK055596 AK092036 AK225681
RefSeq transcript (Entrez)NM_012425 NM_152724
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RSU1
Cluster EST : UnigeneHs.524161 [ NCBI ]
CGAP (NCI)Hs.524161
Alternative Splicing GalleryENSG00000148484
Gene ExpressionRSU1 [ NCBI-GEO ]   RSU1 [ EBI - ARRAY_EXPRESS ]   RSU1 [ SEEK ]   RSU1 [ MEM ]
Gene Expression Viewer (FireBrowse)RSU1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6251
GTEX Portal (Tissue expression)RSU1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ15404   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ15404  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ15404
Splice isoforms : SwissVarQ15404
PhosPhoSitePlusQ15404
Domaine pattern : Prosite (Expaxy)LRR (PS51450)   
Domains : Interpro (EBI)L_dom-like    Leu-rich_rpt    Leu-rich_rpt_typical-subtyp   
Domain families : Pfam (Sanger)LRR_8 (PF13855)   
Domain families : Pfam (NCBI)pfam13855   
Domain families : Smart (EMBL)LRR_TYP (SM00369)  
Conserved Domain (NCBI)RSU1
DMDM Disease mutations6251
Blocks (Seattle)RSU1
SuperfamilyQ15404
Human Protein AtlasENSG00000148484
Peptide AtlasQ15404
HPRD01551
IPIIPI00017256   IPI00478433   IPI00847168   IPI00847440   IPI00377066   
Protein Interaction databases
DIP (DOE-UCLA)Q15404
IntAct (EBI)Q15404
FunCoupENSG00000148484
BioGRIDRSU1
STRING (EMBL)RSU1
ZODIACRSU1
Ontologies - Pathways
QuickGOQ15404
Ontology : AmiGOprotein binding  cytosol  focal adhesion  signal transduction  regulation of cell-substrate adhesion  positive regulation of cell-substrate adhesion  positive regulation of GTPase activity  extracellular exosome  
Ontology : EGO-EBIprotein binding  cytosol  focal adhesion  signal transduction  regulation of cell-substrate adhesion  positive regulation of cell-substrate adhesion  positive regulation of GTPase activity  extracellular exosome  
NDEx NetworkRSU1
Atlas of Cancer Signalling NetworkRSU1
Wikipedia pathwaysRSU1
Orthology - Evolution
OrthoDB6251
GeneTree (enSembl)ENSG00000148484
Phylogenetic Trees/Animal Genes : TreeFamRSU1
HOVERGENQ15404
HOGENOMQ15404
Homologs : HomoloGeneRSU1
Homology/Alignments : Family Browser (UCSC)RSU1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRSU1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RSU1
dbVarRSU1
ClinVarRSU1
1000_GenomesRSU1 
Exome Variant ServerRSU1
ExAC (Exome Aggregation Consortium)RSU1 (select the gene name)
Genetic variants : HAPMAP6251
Genomic Variants (DGV)RSU1 [DGVbeta]
DECIPHERRSU1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRSU1 
Mutations
ICGC Data PortalRSU1 
TCGA Data PortalRSU1 
Broad Tumor PortalRSU1
OASIS PortalRSU1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRSU1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRSU1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RSU1
DgiDB (Drug Gene Interaction Database)RSU1
DoCM (Curated mutations)RSU1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RSU1 (select a term)
intoGenRSU1
Cancer3DRSU1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM179555   
Orphanet
MedgenRSU1
Genetic Testing Registry RSU1
NextProtQ15404 [Medical]
TSGene6251
GENETestsRSU1
Target ValidationRSU1
Huge Navigator RSU1 [HugePedia]
snp3D : Map Gene to Disease6251
BioCentury BCIQRSU1
ClinGenRSU1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD6251
Chemical/Pharm GKB GenePA34876
Clinical trialRSU1
Miscellaneous
canSAR (ICR)RSU1 (select the gene name)
Probes
Litterature
PubMed44 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRSU1
EVEXRSU1
GoPubMedRSU1
iHOPRSU1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:54:06 CEST 2017

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