Atlas of Genetics and Cytogenetics in Oncology and Haematology


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RSU1 (Ras suppressor protein 1)

Identity

Alias (NCBI)RSP-1
HGNC (Hugo) RSU1
HGNC Alias symbRSP-1
FLJ31034
LocusID (NCBI) 6251
Atlas_Id 42179
Location 10p13  [Link to chromosome band 10p13]
Location_base_pair Starts at 16590618 and ends at 16817454 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
BLCAP (20q11.23) / RSU1 (10p13)PRKCQ (10p15.1) / RSU1 (10p13)RSU1 (10p13) / RNF10 (12q24.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)RSU1   10464
Cards
Entrez_Gene (NCBI)RSU1    Ras suppressor protein 1
AliasesRSP-1
GeneCards (Weizmann)RSU1
Ensembl hg19 (Hinxton)ENSG00000148484 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000148484 [Gene_View]  ENSG00000148484 [Sequence]  chr10:16590618-16817454 [Contig_View]  RSU1 [Vega]
ICGC DataPortalENSG00000148484
TCGA cBioPortalRSU1
AceView (NCBI)RSU1
Genatlas (Paris)RSU1
SOURCE (Princeton)RSU1
Genetics Home Reference (NIH)RSU1
Genomic and cartography
GoldenPath hg38 (UCSC)RSU1  -     chr10:16590618-16817454 -  10p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RSU1  -     10p13   [Description]    (hg19-Feb_2009)
GoldenPathRSU1 - 10p13 [CytoView hg19]  RSU1 - 10p13 [CytoView hg38]
ImmunoBaseENSG00000148484
Genome Data Viewer NCBIRSU1 [Mapview hg19]  
OMIM179555   
Gene and transcription
Genbank (Entrez)AK023951 AK024109 AK055596 AK092036 AK225681
RefSeq transcript (Entrez)NM_012425 NM_152724
Consensus coding sequences : CCDS (NCBI)RSU1
Gene ExpressionRSU1 [ NCBI-GEO ]   RSU1 [ EBI - ARRAY_EXPRESS ]   RSU1 [ SEEK ]   RSU1 [ MEM ]
Gene Expression Viewer (FireBrowse)RSU1 [ Firebrowse - Broad ]
GenevisibleExpression of RSU1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)6251
GTEX Portal (Tissue expression)RSU1
Human Protein AtlasENSG00000148484-RSU1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ15404   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ15404  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ15404
PhosPhoSitePlusQ15404
Domaine pattern : Prosite (Expaxy)LRR (PS51450)   
Domains : Interpro (EBI)Leu-rich_rpt    Leu-rich_rpt_typical-subtyp    LRR_dom_sf   
Domain families : Pfam (Sanger)LRR_8 (PF13855)   
Domain families : Pfam (NCBI)pfam13855   
Domain families : Smart (EMBL)LRR_TYP (SM00369)  
Conserved Domain (NCBI)RSU1
SuperfamilyQ15404
AlphaFold pdb e-kbQ15404   
Human Protein Atlas [tissue]ENSG00000148484-RSU1 [tissue]
HPRD01551
Protein Interaction databases
DIP (DOE-UCLA)Q15404
IntAct (EBI)Q15404
BioGRIDRSU1
STRING (EMBL)RSU1
ZODIACRSU1
Ontologies - Pathways
QuickGOQ15404
Ontology : AmiGOprotein binding  cytosol  focal adhesion  signal transduction  regulation of cell-substrate adhesion  positive regulation of cell-substrate adhesion  positive regulation of GTPase activity  extracellular exosome  
Ontology : EGO-EBIprotein binding  cytosol  focal adhesion  signal transduction  regulation of cell-substrate adhesion  positive regulation of cell-substrate adhesion  positive regulation of GTPase activity  extracellular exosome  
NDEx NetworkRSU1
Atlas of Cancer Signalling NetworkRSU1
Wikipedia pathwaysRSU1
Orthology - Evolution
OrthoDB6251
GeneTree (enSembl)ENSG00000148484
Phylogenetic Trees/Animal Genes : TreeFamRSU1
Homologs : HomoloGeneRSU1
Homology/Alignments : Family Browser (UCSC)RSU1
Gene fusions - Rearrangements
Fusion : QuiverRSU1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRSU1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RSU1
dbVarRSU1
ClinVarRSU1
MonarchRSU1
1000_GenomesRSU1 
Exome Variant ServerRSU1
GNOMAD BrowserENSG00000148484
Varsome BrowserRSU1
ACMGRSU1 variants
VarityQ15404
Genomic Variants (DGV)RSU1 [DGVbeta]
DECIPHERRSU1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRSU1 
Mutations
ICGC Data PortalRSU1 
TCGA Data PortalRSU1 
Broad Tumor PortalRSU1
OASIS PortalRSU1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRSU1  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DRSU1
Mutations and Diseases : HGMDRSU1
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaRSU1
DgiDB (Drug Gene Interaction Database)RSU1
DoCM (Curated mutations)RSU1
CIViC (Clinical Interpretations of Variants in Cancer)RSU1
Cancer3DRSU1
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM179555   
Orphanet
DisGeNETRSU1
MedgenRSU1
Genetic Testing Registry RSU1
NextProtQ15404 [Medical]
GENETestsRSU1
Target ValidationRSU1
Huge Navigator RSU1 [HugePedia]
ClinGenRSU1
Clinical trials, drugs, therapy
MyCancerGenomeRSU1
Protein Interactions : CTDRSU1
Pharm GKB GenePA34876
PharosQ15404
Clinical trialRSU1
Miscellaneous
canSAR (ICR)RSU1
HarmonizomeRSU1
DataMed IndexRSU1
Probes
Litterature
PubMed60 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXRSU1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:29:47 CEST 2021

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