RTRAF (RNA transcription, translation and transport factor)

2017-10-01  

Identity

HGNC
LOCATION
14q22.1
LOCUSID
ALIAS
C14orf166,CGI-99,CGI99,CLE,CLE7,LCRP369,RLLM1,hCLE,hCLE1

Other Information

Locus ID:

NCBI: 51637
MIM: 610858
HGNC: 23169
Ensembl: ENSG00000087302

Variants:

dbSNP: 51637
ClinVar: 51637
TCGA: ENSG00000087302
COSMIC: RTRAF

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000087302ENST00000261700Q9Y224
ENSG00000087302ENST00000261700Q549M8
ENSG00000087302ENST00000553362H0YJB9
ENSG00000087302ENST00000556760G3V4C6
ENSG00000087302ENST00000557553G3V4E7

Pathways

PathwaySourceExternal ID
Gene ExpressionREACTOMER-HSA-74160
tRNA processingREACTOMER-HSA-72306
tRNA processing in the nucleusREACTOMER-HSA-6784531

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
218236642011Identification of hnRNPH1, NF45, and C14orf166 as novel host interacting partners of the mature hepatitis C virus core protein.23
191524232009Proteomic profiling in pancreatic cancer with and without lymph node metastasis.22
246082642014hCLE/C14orf166 associates with DDX1-HSPC117-FAM98B in a novel transcription-dependent shuttling RNA-transporting complex.19
219001572011Cellular human CLE/C14orf166 protein interacts with influenza virus polymerase and is required for viral replication.18
151478882004A novel ninein-interaction protein, CGI-99, blocks ninein phosphorylation by GSK3beta and is highly expressed in brain tumors.14
262198952016C14ORF166 overexpression is associated with pelvic lymph node metastasis and poor prognosis in uterine cervical cancer.8
269058792016C14orf166 is a high-risk biomarker for bladder cancer and promotes bladder cancer cell proliferation.5
259640932015Overexpression of chromosome 14 open reading frame 166 correlates with disease progression and poorer prognosis in human NPC.3
268649022016hCLE/C14orf166, a cellular protein required for viral replication, is incorporated into influenza virus particles.2
268830172016C14orf166 overexpression correlates with tumor progression and poor prognosis of breast cancer.1

Citation

Dessen P

RTRAF (RNA transcription, translation and transport factor)

Atlas Genet Cytogenet Oncol Haematol. 2017-10-01

Online version: http://atlasgeneticsoncology.org/gene/57165/rtraf