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RUNX2-AS1 (RUNX2 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) RUNX2-AS1
LocusID (NCBI) 105375077
Atlas_Id 79817
Location 6p21.1  [Link to chromosome band 6p21]
Location_base_pair Starts at 45571719 and ends at 45576770 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)RUNX2-AS1   53512
Cards
Entrez_Gene (NCBI)RUNX2-AS1  105375077  RUNX2 antisense RNA 1
Aliases
GeneCards (Weizmann)RUNX2-AS1
Ensembl hg19 (Hinxton)ENSG00000261080 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000261080 [Gene_View]  ENSG00000261080 [Sequence]  chr6:45571719-45576770 [Contig_View]  RUNX2-AS1 [Vega]
ICGC DataPortalENSG00000261080
TCGA cBioPortalRUNX2-AS1
AceView (NCBI)RUNX2-AS1
Genatlas (Paris)RUNX2-AS1
WikiGenes105375077
SOURCE (Princeton)RUNX2-AS1
Genetics Home Reference (NIH)RUNX2-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)RUNX2-AS1  -     chr6:45571719-45576770 -  6p21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RUNX2-AS1  -     6p21.1   [Description]    (hg19-Feb_2009)
EnsemblRUNX2-AS1 - 6p21.1 [CytoView hg19]  RUNX2-AS1 - 6p21.1 [CytoView hg38]
Mapping of homologs : NCBIRUNX2-AS1 [Mapview hg19]  RUNX2-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC035191
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RUNX2-AS1
Cluster EST : UnigeneHs.714205 [ NCBI ]
CGAP (NCI)Hs.714205
Alternative Splicing GalleryENSG00000261080
Gene ExpressionRUNX2-AS1 [ NCBI-GEO ]   RUNX2-AS1 [ EBI - ARRAY_EXPRESS ]   RUNX2-AS1 [ SEEK ]   RUNX2-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)RUNX2-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105375077
GTEX Portal (Tissue expression)RUNX2-AS1
Human Protein AtlasENSG00000261080-RUNX2-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RUNX2-AS1
DMDM Disease mutations105375077
Blocks (Seattle)RUNX2-AS1
Human Protein Atlas [tissue]ENSG00000261080-RUNX2-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000261080
BioGRIDRUNX2-AS1
STRING (EMBL)RUNX2-AS1
ZODIACRUNX2-AS1
Ontologies - Pathways
Huge Navigator RUNX2-AS1 [HugePedia]
snp3D : Map Gene to Disease105375077
BioCentury BCIQRUNX2-AS1
ClinGenRUNX2-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105375077
Clinical trialRUNX2-AS1
Miscellaneous
canSAR (ICR)RUNX2-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineRUNX2-AS1
EVEXRUNX2-AS1
GoPubMedRUNX2-AS1
iHOPRUNX2-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 14:27:55 CEST 2018

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