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RUSC1-AS1 (RUSC1 antisense RNA 1)

Identity

Alias_namesC1orf104
chromosome 1 open reading frame 104
RUSC1 antisense RNA 1 (non-protein coding)
Alias_symbol (synonym)FLJ35976
Other alias
HGNC (Hugo) RUSC1-AS1
LocusID (NCBI) 284618
Atlas_Id 72941
Location 1q22  [Link to chromosome band 1q22]
Location_base_pair Starts at 155316863 and ends at 155321544 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RUSC1-AS1   26680
Cards
Entrez_Gene (NCBI)RUSC1-AS1  284618  RUSC1 antisense RNA 1
AliasesC1orf104
GeneCards (Weizmann)RUSC1-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:155316863-155321544 [Contig_View]  RUSC1-AS1 [Vega]
TCGA cBioPortalRUSC1-AS1
AceView (NCBI)RUSC1-AS1
Genatlas (Paris)RUSC1-AS1
WikiGenes284618
SOURCE (Princeton)RUSC1-AS1
Genetics Home Reference (NIH)RUSC1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)RUSC1-AS1  -     chr1:155316863-155321544 -  1q22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RUSC1-AS1  -     1q22   [Description]    (hg19-Feb_2009)
EnsemblRUSC1-AS1 - 1q22 [CytoView hg19]  RUSC1-AS1 - 1q22 [CytoView hg38]
Mapping of homologs : NCBIRUSC1-AS1 [Mapview hg19]  RUSC1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK093295 AK125510 AV711145 BC062571 BC080538
RefSeq transcript (Entrez)NM_001039517 NM_173639
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RUSC1-AS1
Cluster EST : UnigeneHs.732744 [ NCBI ]
CGAP (NCI)Hs.732744
Gene ExpressionRUSC1-AS1 [ NCBI-GEO ]   RUSC1-AS1 [ EBI - ARRAY_EXPRESS ]   RUSC1-AS1 [ SEEK ]   RUSC1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)RUSC1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)284618
GTEX Portal (Tissue expression)RUSC1-AS1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ66K80   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ66K80  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ66K80
Splice isoforms : SwissVarQ66K80
PhosPhoSitePlusQ66K80
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)RUSC1-AS1
DMDM Disease mutations284618
Blocks (Seattle)RUSC1-AS1
SuperfamilyQ66K80
Peptide AtlasQ66K80
HPRD08767
IPIIPI00787955   IPI00167884   
Protein Interaction databases
DIP (DOE-UCLA)Q66K80
IntAct (EBI)Q66K80
BioGRIDRUSC1-AS1
STRING (EMBL)RUSC1-AS1
ZODIACRUSC1-AS1
Ontologies - Pathways
QuickGOQ66K80
Ontology : AmiGOprotein binding  
Ontology : EGO-EBIprotein binding  
NDEx NetworkRUSC1-AS1
Atlas of Cancer Signalling NetworkRUSC1-AS1
Wikipedia pathwaysRUSC1-AS1
Orthology - Evolution
OrthoDB284618
Phylogenetic Trees/Animal Genes : TreeFamRUSC1-AS1
HOVERGENQ66K80
HOGENOMQ66K80
Homologs : HomoloGeneRUSC1-AS1
Homology/Alignments : Family Browser (UCSC)RUSC1-AS1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRUSC1-AS1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RUSC1-AS1
dbVarRUSC1-AS1
ClinVarRUSC1-AS1
1000_GenomesRUSC1-AS1 
Exome Variant ServerRUSC1-AS1
ExAC (Exome Aggregation Consortium)RUSC1-AS1 (select the gene name)
Genetic variants : HAPMAP284618
Genomic Variants (DGV)RUSC1-AS1 [DGVbeta]
DECIPHERRUSC1-AS1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRUSC1-AS1 
Mutations
ICGC Data PortalRUSC1-AS1 
TCGA Data PortalRUSC1-AS1 
Broad Tumor PortalRUSC1-AS1
OASIS PortalRUSC1-AS1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDRUSC1-AS1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RUSC1-AS1
DgiDB (Drug Gene Interaction Database)RUSC1-AS1
DoCM (Curated mutations)RUSC1-AS1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RUSC1-AS1 (select a term)
intoGenRUSC1-AS1
Cancer3DRUSC1-AS1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenRUSC1-AS1
Genetic Testing Registry RUSC1-AS1
NextProtQ66K80 [Medical]
TSGene284618
GENETestsRUSC1-AS1
Target ValidationRUSC1-AS1
Huge Navigator RUSC1-AS1 [HugePedia]
snp3D : Map Gene to Disease284618
BioCentury BCIQRUSC1-AS1
ClinGenRUSC1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD284618
Chemical/Pharm GKB GenePA142672488
Clinical trialRUSC1-AS1
Miscellaneous
canSAR (ICR)RUSC1-AS1 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRUSC1-AS1
EVEXRUSC1-AS1
GoPubMedRUSC1-AS1
iHOPRUSC1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:37:05 CEST 2017

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