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RWDD2A (RWD domain containing 2A)

Identity

Alias_namesRWDD2
RWD domain containing 2
Alias_symbol (synonym)MGC13523
dJ747H23.2
Other alias
HGNC (Hugo) RWDD2A
LocusID (NCBI) 112611
Atlas_Id 72944
Location 6q14.1  [Link to chromosome band 6q14]
Location_base_pair Starts at 83193313 and ends at 83198935 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RWDD2A   21385
Cards
Entrez_Gene (NCBI)RWDD2A  112611  RWD domain containing 2A
AliasesRWDD2; dJ747H23.2
GeneCards (Weizmann)RWDD2A
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:83193313-83198935 [Contig_View]  RWDD2A [Vega]
TCGA cBioPortalRWDD2A
AceView (NCBI)RWDD2A
Genatlas (Paris)RWDD2A
WikiGenes112611
SOURCE (Princeton)RWDD2A
Genetics Home Reference (NIH)RWDD2A
Genomic and cartography
GoldenPath hg38 (UCSC)RWDD2A  -     chr6:83193313-83198935 +  6q14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)RWDD2A  -     6q14.1   [Description]    (hg19-Feb_2009)
EnsemblRWDD2A - 6q14.1 [CytoView hg19]  RWDD2A - 6q14.1 [CytoView hg38]
Mapping of homologs : NCBIRWDD2A [Mapview hg19]  RWDD2A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AJ420581 AK295724 AK302978 AK309249 AK313083
RefSeq transcript (Entrez)NM_001322335 NM_001322336 NM_001322337 NM_001322339 NM_033411
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)RWDD2A
Cluster EST : UnigeneHs.709686 [ NCBI ]
CGAP (NCI)Hs.709686
Gene ExpressionRWDD2A [ NCBI-GEO ]   RWDD2A [ EBI - ARRAY_EXPRESS ]   RWDD2A [ SEEK ]   RWDD2A [ MEM ]
Gene Expression Viewer (FireBrowse)RWDD2A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)112611
GTEX Portal (Tissue expression)RWDD2A
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UIY3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UIY3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UIY3
Splice isoforms : SwissVarQ9UIY3
PhosPhoSitePlusQ9UIY3
Domaine pattern : Prosite (Expaxy)RWD (PS50908)   
Domains : Interpro (EBI)DUF1115    RWD-domain    UBQ-conjugating_enzyme/RWD    UCP038021_RWD   
Domain families : Pfam (Sanger)DUF1115 (PF06544)    RWD (PF05773)   
Domain families : Pfam (NCBI)pfam06544    pfam05773   
Domain families : Smart (EMBL)RWD (SM00591)  
Conserved Domain (NCBI)RWDD2A
DMDM Disease mutations112611
Blocks (Seattle)RWDD2A
PDB (SRS)2DAW   
PDB (PDBSum)2DAW   
PDB (IMB)2DAW   
PDB (RSDB)2DAW   
Structural Biology KnowledgeBase2DAW   
SCOP (Structural Classification of Proteins)2DAW   
CATH (Classification of proteins structures)2DAW   
SuperfamilyQ9UIY3
Peptide AtlasQ9UIY3
HPRD15287
IPIIPI00296536   IPI01012635   
Protein Interaction databases
DIP (DOE-UCLA)Q9UIY3
IntAct (EBI)Q9UIY3
BioGRIDRWDD2A
STRING (EMBL)RWDD2A
ZODIACRWDD2A
Ontologies - Pathways
QuickGOQ9UIY3
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkRWDD2A
Atlas of Cancer Signalling NetworkRWDD2A
Wikipedia pathwaysRWDD2A
Orthology - Evolution
OrthoDB112611
Phylogenetic Trees/Animal Genes : TreeFamRWDD2A
HOVERGENQ9UIY3
HOGENOMQ9UIY3
Homologs : HomoloGeneRWDD2A
Homology/Alignments : Family Browser (UCSC)RWDD2A
Gene fusions - Rearrangements
Fusion : QuiverRWDD2A
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRWDD2A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RWDD2A
dbVarRWDD2A
ClinVarRWDD2A
1000_GenomesRWDD2A 
Exome Variant ServerRWDD2A
Varsome BrowserRWDD2A
Genetic variants : HAPMAP112611
Genomic Variants (DGV)RWDD2A [DGVbeta]
DECIPHERRWDD2A [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisRWDD2A 
Mutations
ICGC Data PortalRWDD2A 
TCGA Data PortalRWDD2A 
Broad Tumor PortalRWDD2A
OASIS PortalRWDD2A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRWDD2A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRWDD2A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RWDD2A
DgiDB (Drug Gene Interaction Database)RWDD2A
DoCM (Curated mutations)RWDD2A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RWDD2A (select a term)
intoGenRWDD2A
Cancer3DRWDD2A(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETRWDD2A
MedgenRWDD2A
Genetic Testing Registry RWDD2A
NextProtQ9UIY3 [Medical]
TSGene112611
GENETestsRWDD2A
Target ValidationRWDD2A
Huge Navigator RWDD2A [HugePedia]
snp3D : Map Gene to Disease112611
BioCentury BCIQRWDD2A
ClinGenRWDD2A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD112611
Chemical/Pharm GKB GenePA162402307
Clinical trialRWDD2A
Miscellaneous
canSAR (ICR)RWDD2A (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRWDD2A
EVEXRWDD2A
GoPubMedRWDD2A
iHOPRWDD2A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Jul 30 14:27:56 CEST 2018

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