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RXFP1 (relaxin/insulin-like family peptide receptor 1)

Identity

Other namesLGR7
RXFPR1
HGNC (Hugo) RXFP1
LocusID (NCBI) 59350
Location 4q32.1
Location_base_pair Starts at 159442866 and ends at 159574521 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)RXFP1   19718
Entrez_Gene (NCBI)RXFP1  59350  relaxin/insulin-like family peptide receptor 1
Cards
GeneCards (Weizmann)RXFP1
Ensembl (Hinxton)ENSG00000171509 [Gene_View]  chr4:159442866-159574521 [Contig_View]  RXFP1 [Vega]
AceView (NCBI)RXFP1
Genatlas (Paris)RXFP1
SOURCE (Stanford)NM_001253727 NM_001253728 NM_001253729 NM_001253730 NM_001253732 NM_001253733 NM_021634
Genomic and cartography
GoldenPath (UCSC)RXFP1  -  4q32.1   chr4:159442866-159574521 +  4q32.1   [Description]    (hg19-Feb_2009)
EnsemblRXFP1 - 4q32.1 [CytoView]
Mapping of homologs : NCBIRXFP1 [Mapview]
OMIM606654   
Gene and transcription
Genbank (Entrez)AB208943 AF190500 AI653269 AK122647 AK294694
RefSeq transcript (SRS)NM_001253727 NM_001253728 NM_001253729 NM_001253730 NM_001253732 NM_001253733 NM_021634
RefSeq transcript (Entrez)NM_001253727 NM_001253728 NM_001253729 NM_001253730 NM_001253732 NM_001253733 NM_021634
RefSeq genomic (SRS)AC_000136 NC_000004 NC_018915 NG_031835 NT_016354 NW_001838921 NW_004078021
RefSeq genomic (Entrez)AC_000136 NC_000004 NC_018915 NG_031835 NT_016354 NW_001838921 NW_004078021
Consensus coding sequences : CCDS (NCBI)RXFP1
Cluster EST : UnigeneHs.591686 [ SRS ] Hs.591686 [ NCBI ]
CGAP (NCI)Hs.591686
Alternative Splicing : Fast-db (Paris)GSHG0022948
Alternative Splicing GalleryENSG00000171509
Gene ExpressionRXFP1 [ NCBI-GEO ]   RXFP1 [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HBX9 (SRS) Q9HBX9 (Uniprot)
NextProtQ9HBX9
With graphics : InterProQ9HBX9
Splice isoforms : SwissVarQ9HBX9(Swissvar)
Domaine pattern : Prosite (SRS)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)    LDLRA_1 (PS01209)    LDLRA_2 (PS50068)    LRR (PS51450)   
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_1 (PS00237)    G_PROTEIN_RECEP_F1_2 (PS50262)    LDLRA_1 (PS01209)    LDLRA_2 (PS50068)    LRR (PS51450)   
Domains : Interpro (SRS)7TM_GPCR_Rhodpsn    GPCR_Rhodpsn_supfam    LDLR_class-A_CS    LDrepeatLR_classA_rpt    Leu-rich_rpt    Leu-rich_rpt_typical-subtyp    LRR-contain_N    Relaxin_rcpt   
Domains : Interpro (EBI)7TM_GPCR_Rhodpsn    GPCR_Rhodpsn_supfam    LDLR_class-A_CS    LDrepeatLR_classA_rpt    Leu-rich_rpt    Leu-rich_rpt_typical-subtyp    LRR-contain_N    Relaxin_rcpt   
Related proteins : CluSTrQ9HBX9
Domain families : Pfam (SRS)7tm_1 (PF00001)    Ldl_recept_a (PF00057)   
Domain families : Pfam (Sanger)7tm_1 (PF00001)    Ldl_recept_a (PF00057)   
Domain families : Pfam (NCBI)pfam00001    pfam00057   
Domain families : Smart (EMBL)LDLa (SM00192)  LRR_TYP (SM00369)  LRRNT (SM00013)  
DMDM59350
Blocks (Seattle)Q9HBX9
PDB (SRS)2JM4   
PDB (PDBSum)2JM4   
PDB (IMB)2JM4   
PDB (RSDB)2JM4   
Human Protein AtlasENSG00000171509
HPRD05975
IPIIPI00219888   IPI00876893   IPI00654878   IPI00012456   IPI00916911   IPI00910652   IPI00965023   IPI00984452   
Protein Interaction databases
DIP (DOE-UCLA)Q9HBX9
IntAct (EBI)Q9HBX9
FunCoupENSG00000171509
REACTOMERXFP1
Protein Interaction Database59350
BioGRIDRXFP1
InParanoidQ9HBX9
Interologous Interaction database Q9HBX9
IntegromeDBRXFP1
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)RXFP1
SNP (GeneSNP Utah)RXFP1
SNP : HGBaseRXFP1
Genetic variants : HAPMAPRXFP1
Somatic Mutations in Cancer : COSMICRXFP1 
CONAN: Copy Number AnalysisRXFP1 
Mutations and Diseases : HGMDRXFP1
OMIM606654   
GENETests606654   
Disease Genetic AssociationRXFP1
Huge Navigator RXFP1 [HugePedia]  RXFP1 [HugeCancerGEM]
Genomic VariantsRXFP1  RXFP1 [DGVbeta]
snp3D : Map Gene to Disease59350
General knowledge
Homologs : HomoloGeneRXFP1
Homology/Alignments : Family Browser (UCSC)RXFP1
Phylogenetic Trees/Animal Genes : TreeFamRXFP1
Chemical/Protein Interactions : CTD59350
Chemical/Pharm GKB GenePA134868312
Clinical trialRXFP1
Cancer Resource (Charite)ENSG00000171509
Ontology : AmiGOG-protein coupled receptor activity  plasma membrane  adenylate cyclase-activating G-protein coupled receptor signaling pathway  parturition  integral to membrane  cell differentiation  extracellular matrix organization  hormone binding  metal ion binding  lung connective tissue development  nipple morphogenesis  
Ontology : EGO-EBIG-protein coupled receptor activity  plasma membrane  adenylate cyclase-activating G-protein coupled receptor signaling pathway  parturition  integral to membrane  cell differentiation  extracellular matrix organization  hormone binding  metal ion binding  lung connective tissue development  nipple morphogenesis  
Pathways : KEGGNeuroactive ligand-receptor interaction
Other databases
Probes
Litterature
PubMed52 Pubmed reference(s) in Entrez
PubGeneRXFP1
iHOPRXFP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:24:07 CEST 2013
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