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RXFP4 (relaxin/insulin-like family peptide receptor 4)

Identity

Alias_namesGPR100
RLN3R2
G protein-coupled receptor 100
relaxin 3 receptor 2
relaxin family peptide receptor 4
Alias_symbol (synonym)GPCR142
RXFPR4
Other alias
HGNC (Hugo) RXFP4
LocusID (NCBI) 339403
Atlas_Id 72947
Location 1q22  [Link to chromosome band 1q22]
Location_base_pair Starts at 155911480 and ends at 155912625 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)RXFP4   14666
Cards
Entrez_Gene (NCBI)RXFP4  339403  relaxin/insulin-like family peptide receptor 4
AliasesGPCR142; GPR100; RLN3R2; RXFPR4
GeneCards (Weizmann)RXFP4
Ensembl hg19 (Hinxton)ENSG00000173080 [Gene_View]  chr1:155911480-155912625 [Contig_View]  RXFP4 [Vega]
Ensembl hg38 (Hinxton)ENSG00000173080 [Gene_View]  chr1:155911480-155912625 [Contig_View]  RXFP4 [Vega]
ICGC DataPortalENSG00000173080
TCGA cBioPortalRXFP4
AceView (NCBI)RXFP4
Genatlas (Paris)RXFP4
WikiGenes339403
SOURCE (Princeton)RXFP4
Genetics Home Reference (NIH)RXFP4
Genomic and cartography
GoldenPath hg19 (UCSC)RXFP4  -     chr1:155911480-155912625 +  1q22   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)RXFP4  -     1q22   [Description]    (hg38-Dec_2013)
EnsemblRXFP4 - 1q22 [CytoView hg19]  RXFP4 - 1q22 [CytoView hg38]
Mapping of homologs : NCBIRXFP4 [Mapview hg19]  RXFP4 [Mapview hg38]
OMIM609043   
Gene and transcription
Genbank (Entrez)AY170824 AY288415 AY394502 BC101507 BC101509
RefSeq transcript (Entrez)NM_181885
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_004487 NW_004929293
Consensus coding sequences : CCDS (NCBI)RXFP4
Cluster EST : UnigeneHs.449914 [ NCBI ]
CGAP (NCI)Hs.449914
Alternative Splicing GalleryENSG00000173080
Gene ExpressionRXFP4 [ NCBI-GEO ]   RXFP4 [ EBI - ARRAY_EXPRESS ]   RXFP4 [ SEEK ]   RXFP4 [ MEM ]
Gene Expression Viewer (FireBrowse)RXFP4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)339403
GTEX Portal (Tissue expression)RXFP4
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8TDU9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8TDU9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8TDU9
Splice isoforms : SwissVarQ8TDU9
PhosPhoSitePlusQ8TDU9
Domaine pattern : Prosite (Expaxy)G_PROTEIN_RECEP_F1_2 (PS50262)   
Domains : Interpro (EBI)ATII_rcpt    GPCR_Rhodpsn    GPCR_Rhodpsn_7TM   
Domain families : Pfam (Sanger)7tm_1 (PF00001)   
Domain families : Pfam (NCBI)pfam00001   
Conserved Domain (NCBI)RXFP4
DMDM Disease mutations339403
Blocks (Seattle)RXFP4
SuperfamilyQ8TDU9
Human Protein AtlasENSG00000173080
Peptide AtlasQ8TDU9
HPRD16421
IPIIPI00291503   
Protein Interaction databases
DIP (DOE-UCLA)Q8TDU9
IntAct (EBI)Q8TDU9
FunCoupENSG00000173080
BioGRIDRXFP4
STRING (EMBL)RXFP4
ZODIACRXFP4
Ontologies - Pathways
QuickGOQ8TDU9
Ontology : AmiGOangiotensin type II receptor activity  protein binding  plasma membrane  integral component of membrane  angiotensin-activated signaling pathway  
Ontology : EGO-EBIangiotensin type II receptor activity  protein binding  plasma membrane  integral component of membrane  angiotensin-activated signaling pathway  
NDEx NetworkRXFP4
Atlas of Cancer Signalling NetworkRXFP4
Wikipedia pathwaysRXFP4
Orthology - Evolution
OrthoDB339403
GeneTree (enSembl)ENSG00000173080
Phylogenetic Trees/Animal Genes : TreeFamRXFP4
HOVERGENQ8TDU9
HOGENOMQ8TDU9
Homologs : HomoloGeneRXFP4
Homology/Alignments : Family Browser (UCSC)RXFP4
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerRXFP4 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)RXFP4
dbVarRXFP4
ClinVarRXFP4
1000_GenomesRXFP4 
Exome Variant ServerRXFP4
ExAC (Exome Aggregation Consortium)RXFP4 (select the gene name)
Genetic variants : HAPMAP339403
Genomic Variants (DGV)RXFP4 [DGVbeta]
DECIPHER (Syndromes)1:155911480-155912625  ENSG00000173080
CONAN: Copy Number AnalysisRXFP4 
Mutations
ICGC Data PortalRXFP4 
TCGA Data PortalRXFP4 
Broad Tumor PortalRXFP4
OASIS PortalRXFP4 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICRXFP4  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDRXFP4
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch RXFP4
DgiDB (Drug Gene Interaction Database)RXFP4
DoCM (Curated mutations)RXFP4 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)RXFP4 (select a term)
intoGenRXFP4
Cancer3DRXFP4(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609043   
Orphanet
MedgenRXFP4
Genetic Testing Registry RXFP4
NextProtQ8TDU9 [Medical]
TSGene339403
GENETestsRXFP4
Huge Navigator RXFP4 [HugePedia]
snp3D : Map Gene to Disease339403
BioCentury BCIQRXFP4
ClinGenRXFP4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD339403
Chemical/Pharm GKB GenePA28848
Clinical trialRXFP4
Miscellaneous
canSAR (ICR)RXFP4 (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineRXFP4
EVEXRXFP4
GoPubMedRXFP4
iHOPRXFP4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 12:42:11 CET 2017

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