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S100A14 (S100 calcium binding protein A14)

Identity

Alias_symbol (synonym)S100A15
BCMP84
Other alias
HGNC (Hugo) S100A14
LocusID (NCBI) 57402
Atlas_Id 50987
Location 1q21.3  [Link to chromosome band 1q21]
Location_base_pair Starts at 153614256 and ends at 153616332 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
PRSS8 (16p11.2) / S100A14 (1q21.3)S100A14 (1q21.3) / S100A14 (1q21.3)TCF7 (5q31.1) / S100A14 (1q21.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)S100A14   18901
Cards
Entrez_Gene (NCBI)S100A14  57402  S100 calcium binding protein A14
AliasesBCMP84; S100A15
GeneCards (Weizmann)S100A14
Ensembl hg19 (Hinxton)ENSG00000189334 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000189334 [Gene_View]  chr1:153614256-153616332 [Contig_View]  S100A14 [Vega]
ICGC DataPortalENSG00000189334
TCGA cBioPortalS100A14
AceView (NCBI)S100A14
Genatlas (Paris)S100A14
WikiGenes57402
SOURCE (Princeton)S100A14
Genetics Home Reference (NIH)S100A14
Genomic and cartography
GoldenPath hg38 (UCSC)S100A14  -     chr1:153614256-153616332 -  1q21.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)S100A14  -     1q21.3   [Description]    (hg19-Feb_2009)
EnsemblS100A14 - 1q21.3 [CytoView hg19]  S100A14 - 1q21.3 [CytoView hg38]
Mapping of homologs : NCBIS100A14 [Mapview hg19]  S100A14 [Mapview hg38]
OMIM607986   
Gene and transcription
Genbank (Entrez)AY007220 BC005019 BG677973 HQ447959
RefSeq transcript (Entrez)NM_020672
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)S100A14
Cluster EST : UnigeneHs.288998 [ NCBI ]
CGAP (NCI)Hs.288998
Alternative Splicing GalleryENSG00000189334
Gene ExpressionS100A14 [ NCBI-GEO ]   S100A14 [ EBI - ARRAY_EXPRESS ]   S100A14 [ SEEK ]   S100A14 [ MEM ]
Gene Expression Viewer (FireBrowse)S100A14 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57402
GTEX Portal (Tissue expression)S100A14
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9HCY8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9HCY8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9HCY8
Splice isoforms : SwissVarQ9HCY8
PhosPhoSitePlusQ9HCY8
Domains : Interpro (EBI)EF-hand-dom_pair    S100_Ca-bd_sub    S100A14   
Domain families : Pfam (Sanger)S_100 (PF01023)   
Domain families : Pfam (NCBI)pfam01023   
Domain families : Smart (EMBL)S_100 (SM01394)  
Conserved Domain (NCBI)S100A14
DMDM Disease mutations57402
Blocks (Seattle)S100A14
PDB (SRS)2M0R   
PDB (PDBSum)2M0R   
PDB (IMB)2M0R   
PDB (RSDB)2M0R   
Structural Biology KnowledgeBase2M0R   
SCOP (Structural Classification of Proteins)2M0R   
CATH (Classification of proteins structures)2M0R   
SuperfamilyQ9HCY8
Human Protein AtlasENSG00000189334
Peptide AtlasQ9HCY8
HPRD10467
IPIIPI00010214   
Protein Interaction databases
DIP (DOE-UCLA)Q9HCY8
IntAct (EBI)Q9HCY8
FunCoupENSG00000189334
BioGRIDS100A14
STRING (EMBL)S100A14
ZODIACS100A14
Ontologies - Pathways
QuickGOQ9HCY8
Ontology : AmiGOcalcium ion binding  protein binding  cytosol  apoptotic process  nuclear body  cell junction  response to lipopolysaccharide  toll-like receptor 4 signaling pathway  chemokine receptor binding  defense response to bacterium  perinuclear region of cytoplasm  calcium ion homeostasis  extracellular exosome  positive regulation of granulocyte chemotaxis  positive regulation of monocyte chemotaxis  
Ontology : EGO-EBIcalcium ion binding  protein binding  cytosol  apoptotic process  nuclear body  cell junction  response to lipopolysaccharide  toll-like receptor 4 signaling pathway  chemokine receptor binding  defense response to bacterium  perinuclear region of cytoplasm  calcium ion homeostasis  extracellular exosome  positive regulation of granulocyte chemotaxis  positive regulation of monocyte chemotaxis  
NDEx NetworkS100A14
Atlas of Cancer Signalling NetworkS100A14
Wikipedia pathwaysS100A14
Orthology - Evolution
OrthoDB57402
GeneTree (enSembl)ENSG00000189334
Phylogenetic Trees/Animal Genes : TreeFamS100A14
HOVERGENQ9HCY8
HOGENOMQ9HCY8
Homologs : HomoloGeneS100A14
Homology/Alignments : Family Browser (UCSC)S100A14
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerS100A14 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)S100A14
dbVarS100A14
ClinVarS100A14
1000_GenomesS100A14 
Exome Variant ServerS100A14
ExAC (Exome Aggregation Consortium)S100A14 (select the gene name)
Genetic variants : HAPMAP57402
Genomic Variants (DGV)S100A14 [DGVbeta]
DECIPHERS100A14 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisS100A14 
Mutations
ICGC Data PortalS100A14 
TCGA Data PortalS100A14 
Broad Tumor PortalS100A14
OASIS PortalS100A14 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICS100A14  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDS100A14
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch S100A14
DgiDB (Drug Gene Interaction Database)S100A14
DoCM (Curated mutations)S100A14 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)S100A14 (select a term)
intoGenS100A14
Cancer3DS100A14(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM607986   
Orphanet
MedgenS100A14
Genetic Testing Registry S100A14
NextProtQ9HCY8 [Medical]
TSGene57402
GENETestsS100A14
Target ValidationS100A14
Huge Navigator S100A14 [HugePedia]
snp3D : Map Gene to Disease57402
BioCentury BCIQS100A14
ClinGenS100A14
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57402
Chemical/Pharm GKB GenePA134905502
Clinical trialS100A14
Miscellaneous
canSAR (ICR)S100A14 (select the gene name)
Probes
Litterature
PubMed42 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineS100A14
EVEXS100A14
GoPubMedS100A14
iHOPS100A14
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 17:13:37 CEST 2017

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