SAAL1 (serum amyloid A like 1)

2016-10-01  

Identity

HGNC
SAAL1
LOCATION
11p15.1
LOCUSID
113174
ALIAS
SPACIA1
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 113174
HGNC: 25158
Ensembl: ENSG00000166788

Variants:

dbSNP: 113174
ClinVar: 113174
TCGA: ENSG00000166788
COSMIC: SAAL1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000166788ENST00000300013J3KND1
ENSG00000166788ENST00000524803Q96ER3
ENSG00000166788ENST00000524803G1UCX3
ENSG00000166788ENST00000529318E9PRZ1
ENSG00000166788ENST00000530180E9PL53
ENSG00000166788ENST00000530436H0YCN7
ENSG00000166788ENST00000531581E9PMD2
ENSG00000166788ENST00000531751H0YEK5
ENSG00000166788ENST00000532452H0YDM3

Expression (GTEx)

0
5
10
15
20
25
30
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
221277012011Overexpression of SPACIA1/SAAL1, a newly identified gene that is involved in synoviocyte proliferation, accelerates the progression of synovitis in mice and humans.5

Citation

Dessen P

SAAL1 (serum amyloid A like 1)

Atlas Genet Cytogenet Oncol Haematol. 2016-10-01

Online version: http://atlasgeneticsoncology.org/gene/56101/saal1