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SAGE2P (sarcoma antigen 2, pseudogene)

Identity

Other alias-
HGNC (Hugo) SAGE2P
LocusID (NCBI) 644717
Atlas_Id 54926
Location Xq26.3  [Link to chromosome band Xq26]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)SAGE2P   51337
Cards
Entrez_Gene (NCBI)SAGE2P  644717  sarcoma antigen 2, pseudogene
Aliases
GeneCards (Weizmann)SAGE2P
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  - [Contig_View]  SAGE2P [Vega]
TCGA cBioPortalSAGE2P
AceView (NCBI)SAGE2P
Genatlas (Paris)SAGE2P
WikiGenes644717
SOURCE (Princeton)SAGE2P
Genetics Home Reference (NIH)SAGE2P
Genomic and cartography
GoldenPath hg38 (UCSC)SAGE2P  -  
GoldenPath hg19 (UCSC)SAGE2P  -  
EnsemblSAGE2P - [CytoView hg19]  SAGE2P - [CytoView hg38]
Mapping of homologs : NCBISAGE2P [Mapview hg19]  SAGE2P [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SAGE2P
Gene ExpressionSAGE2P [ NCBI-GEO ]   SAGE2P [ EBI - ARRAY_EXPRESS ]   SAGE2P [ SEEK ]   SAGE2P [ MEM ]
Gene Expression Viewer (FireBrowse)SAGE2P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)644717
GTEX Portal (Tissue expression)SAGE2P
Protein : pattern, domain, 3D structure
UniProt/SwissProtA6NJ88   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA6NJ88  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA6NJ88
Splice isoforms : SwissVarA6NJ88
PhosPhoSitePlusA6NJ88
Domains : Interpro (EBI)INT_SG_DDX_CT_C   
Domain families : Pfam (Sanger)INT_SG_DDX_CT_C (PF15300)   
Domain families : Pfam (NCBI)pfam15300   
Conserved Domain (NCBI)SAGE2P
DMDM Disease mutations644717
Blocks (Seattle)SAGE2P
SuperfamilyA6NJ88
Peptide AtlasA6NJ88
IPIIPI00455967   
Protein Interaction databases
DIP (DOE-UCLA)A6NJ88
IntAct (EBI)A6NJ88
BioGRIDSAGE2P
STRING (EMBL)SAGE2P
ZODIACSAGE2P
Ontologies - Pathways
QuickGOA6NJ88
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkSAGE2P
Atlas of Cancer Signalling NetworkSAGE2P
Wikipedia pathwaysSAGE2P
Orthology - Evolution
OrthoDB644717
Phylogenetic Trees/Animal Genes : TreeFamSAGE2P
HOVERGENA6NJ88
HOGENOMA6NJ88
Homologs : HomoloGeneSAGE2P
Homology/Alignments : Family Browser (UCSC)SAGE2P
Gene fusions - Rearrangements
Tumor Fusion PortalSAGE2P
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSAGE2P [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SAGE2P
dbVarSAGE2P
ClinVarSAGE2P
1000_GenomesSAGE2P 
Exome Variant ServerSAGE2P
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP644717
Genomic Variants (DGV)SAGE2P [DGVbeta]
DECIPHERSAGE2P [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSAGE2P 
Mutations
ICGC Data PortalSAGE2P 
TCGA Data PortalSAGE2P 
Broad Tumor PortalSAGE2P
OASIS PortalSAGE2P [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDSAGE2P
BioMutasearch SAGE2P
DgiDB (Drug Gene Interaction Database)SAGE2P
DoCM (Curated mutations)SAGE2P (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SAGE2P (select a term)
intoGenSAGE2P
Cancer3DSAGE2P(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETSAGE2P
MedgenSAGE2P
Genetic Testing Registry SAGE2P
NextProtA6NJ88 [Medical]
TSGene644717
GENETestsSAGE2P
Target ValidationSAGE2P
Huge Navigator SAGE2P [HugePedia]
snp3D : Map Gene to Disease644717
BioCentury BCIQSAGE2P
ClinGenSAGE2P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD644717
Clinical trialSAGE2P
Miscellaneous
canSAR (ICR)SAGE2P (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSAGE2P
EVEXSAGE2P
GoPubMedSAGE2P
iHOPSAGE2P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:33:25 CET 2017

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