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SALRNA1 (senescence associated long non-coding RNA 1)

Identity

Alias_symbol (synonym)SAL-RNA1
XLOC_023166
Other alias
HGNC (Hugo) SALRNA1
LocusID (NCBI) 104548971
Atlas_Id 76526
Location 14q23.1  [Link to chromosome band 14q23]
Location_base_pair Starts at 60639216 and ends at 60640416 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SALRNA1   49001
Cards
Entrez_Gene (NCBI)SALRNA1  104548971  senescence associated long non-coding RNA 1
AliasesSAL-RNA1; XLOC_023166
GeneCards (Weizmann)SALRNA1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr14:60639216-60640416 [Contig_View]  SALRNA1 [Vega]
TCGA cBioPortalSALRNA1
AceView (NCBI)SALRNA1
Genatlas (Paris)SALRNA1
WikiGenes104548971
SOURCE (Princeton)SALRNA1
Genetics Home Reference (NIH)SALRNA1
Genomic and cartography
GoldenPath hg38 (UCSC)SALRNA1  -     chr14:60639216-60640416 +  14q23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SALRNA1  -     14q23.1   [Description]    (hg19-Feb_2009)
EnsemblSALRNA1 - 14q23.1 [CytoView hg19]  SALRNA1 - 14q23.1 [CytoView hg38]
Mapping of homologs : NCBISALRNA1 [Mapview hg19]  SALRNA1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SALRNA1
Gene ExpressionSALRNA1 [ NCBI-GEO ]   SALRNA1 [ EBI - ARRAY_EXPRESS ]   SALRNA1 [ SEEK ]   SALRNA1 [ MEM ]
Gene Expression Viewer (FireBrowse)SALRNA1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)104548971
GTEX Portal (Tissue expression)SALRNA1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SALRNA1
DMDM Disease mutations104548971
Blocks (Seattle)SALRNA1
Protein Interaction databases
BioGRIDSALRNA1
STRING (EMBL)SALRNA1
ZODIACSALRNA1
Ontologies - Pathways
Huge Navigator SALRNA1 [HugePedia]
snp3D : Map Gene to Disease104548971
BioCentury BCIQSALRNA1
ClinGenSALRNA1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD104548971
Clinical trialSALRNA1
Miscellaneous
canSAR (ICR)SALRNA1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSALRNA1
EVEXSALRNA1
GoPubMedSALRNA1
iHOPSALRNA1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:39:47 CEST 2017

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