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SALRNA2 (senescence associated long non-coding RNA 2)

Identity

Alias_symbol (synonym)SAL-RNA2
XLOC_025931
Other alias
HGNC (Hugo) SALRNA2
LocusID (NCBI) 104548973
Atlas_Id 76797
Location 15q23  [Link to chromosome band 15q23]
Location_base_pair Starts at 70635249 and ends at 70637314 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SALRNA2   49003
Cards
Entrez_Gene (NCBI)SALRNA2  104548973  senescence associated long non-coding RNA 2
AliasesSAL-RNA2; XLOC_025931
GeneCards (Weizmann)SALRNA2
Ensembl hg19 (Hinxton)ENSG00000280515 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000280515 [Gene_View]  chr15:70635249-70637314 [Contig_View]  SALRNA2 [Vega]
ICGC DataPortalENSG00000280515
TCGA cBioPortalSALRNA2
AceView (NCBI)SALRNA2
Genatlas (Paris)SALRNA2
WikiGenes104548973
SOURCE (Princeton)SALRNA2
Genetics Home Reference (NIH)SALRNA2
Genomic and cartography
GoldenPath hg38 (UCSC)SALRNA2  -     chr15:70635249-70637314 +  15q23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SALRNA2  -     15q23   [Description]    (hg19-Feb_2009)
EnsemblSALRNA2 - 15q23 [CytoView hg19]  SALRNA2 - 15q23 [CytoView hg38]
Mapping of homologs : NCBISALRNA2 [Mapview hg19]  SALRNA2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SALRNA2
Alternative Splicing GalleryENSG00000280515
Gene ExpressionSALRNA2 [ NCBI-GEO ]   SALRNA2 [ EBI - ARRAY_EXPRESS ]   SALRNA2 [ SEEK ]   SALRNA2 [ MEM ]
Gene Expression Viewer (FireBrowse)SALRNA2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)104548973
GTEX Portal (Tissue expression)SALRNA2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SALRNA2
DMDM Disease mutations104548973
Blocks (Seattle)SALRNA2
Human Protein AtlasENSG00000280515
Protein Interaction databases
FunCoupENSG00000280515
BioGRIDSALRNA2
STRING (EMBL)SALRNA2
ZODIACSALRNA2
Ontologies - Pathways
Huge Navigator SALRNA2 [HugePedia]
snp3D : Map Gene to Disease104548973
BioCentury BCIQSALRNA2
ClinGenSALRNA2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD104548973
Clinical trialSALRNA2
Miscellaneous
canSAR (ICR)SALRNA2 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSALRNA2
EVEXSALRNA2
GoPubMedSALRNA2
iHOPSALRNA2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:39:47 CEST 2017

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