SAP30BP (SAP30 binding protein)

2014-11-01  

Identity

HGNC
SAP30BP
LOCATION
17q25.1
LOCUSID
29115
ALIAS
HCNGP,HTRG,HTRP
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 29115
MIM: 610218
HGNC: 30785
Ensembl: ENSG00000161526

Variants:

dbSNP: 29115
ClinVar: 29115
TCGA: ENSG00000161526
COSMIC: SAP30BP

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000161526ENST00000293208X6R3T8
ENSG00000161526ENST00000355423Q9UHR5
ENSG00000161526ENST00000542343F5H478
ENSG00000161526ENST00000578909J3KS14
ENSG00000161526ENST00000579877J3QS04
ENSG00000161526ENST00000580322J3QLH3
ENSG00000161526ENST00000582022J3KRU5
ENSG00000161526ENST00000583063J3KRR6
ENSG00000161526ENST00000583170J3QKW0
ENSG00000161526ENST00000583536J3QQJ0
ENSG00000161526ENST00000583737J3QKW0
ENSG00000161526ENST00000584240J3QLM2
ENSG00000161526ENST00000584667Q9UHR5
ENSG00000161526ENST00000584667A0A024R8R0

Expression (GTEx)

0
10
20
30
40
50
60
70
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
Gene ExpressionREACTOMER-HSA-74160
Epigenetic regulation of gene expressionREACTOMER-HSA-212165
Negative epigenetic regulation of rRNA expressionREACTOMER-HSA-5250941
NoRC negatively regulates rRNA expressionREACTOMER-HSA-427413

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
205322022010Use of genome-wide expression data to mine the "Gray Zone" of GWA studies leads to novel candidate obesity genes.34
263508782016Genome-wide association study for rotator cuff tears identifies two significant single-nucleotide polymorphisms.13
283714102017New genes associated with rheumatoid arthritis identified by gene expression profiling.3
154965872004HTRP--an immediate-early gene product induced by HSV1 infection in human embryo fibroblasts, is involved in cellular co-repressors.1
212219202010Transcriptional regulation by HSV-1 induced HTRP via acetylation system.1

Citation

Dessen P

SAP30BP (SAP30 binding protein)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/72976/sap30bp