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SAP30L-AS1 (SAP30L antisense RNA 1 (head to head))

Identity

Alias_symbol (synonym)FLJ38109
GALNT10-AS1
Other alias
HGNC (Hugo) SAP30L-AS1
LocusID (NCBI) 386627
Atlas_Id 72977
Location 5q33.2  [Link to chromosome band 5q33]
Location_base_pair Starts at 154389769 and ends at 154445822 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion CAncer< CGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SAP30L-AS1   26760
Cards
Entrez_Gene (NCBI)SAP30L-AS1  386627  SAP30L antisense RNA 1 (head to head)
AliasesGALNT10-AS1
GeneCards (Weizmann)sAP30\-S1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:154389769-154445822 [Contig_View]  SAP30L-AS1 [Vega]
TCGA cBioPortalSAP30L-AS1
AceView (NCBI)SAP30L-AS1
Genatlas (Paris)SAP30L-AS1
WikiGenes386627
SOURCE (Princeton)SAP30L-AS1
Genetics Home Reference (NIH)SAP30L-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)SAP30L-AS1  -     chr5:154389769-154445822 -  5q33.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SAP30L-AS1  -     5q33.2   [Description]    (hg19-Feb_2009)
EnsemblSAP30L-AS1 - 5q33.2 [CytoView hg19]  SAP30L-AS1 - 5q33.2 [CytoView hg38]
Mapping of homologs : NCBISAP30L-AS1 [Mapview hg19]  SAP30L-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK095428 BC042059 DB100745
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SAP30L-AS1
Cluster EST : UnigeneHs.652021 [ NCBI ]
CGAP (NCI)Hs.652021
Gene ExpressionSAP30L-AS1 [ NCBI-GEO ]   SAP30L-AS1 [ EBI - ARRAY_EXPRESS ]   SAP30L-AS1 [ SEEK ]   SAP30L-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SAP30L-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)386627
GTEX Portal (Tissue expression)SAP30L-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SAP30L-AS1
DMDM Disease mutations386627
Blocks (Seattle)SAP30L-AS1
Protein Interaction databases
BioGRIDSAP30L-AS1
STRING (EMBL)SAP30L-AS1
ZODIACSAP30L-AS1
Ontologies - Pathways
Huge Navigator SAP30L-AS1 [HugePedia]
snp3D : Map Gene to Disease386627
BioCentury BCIQSAP30L-AS1
ClinGenSAP30L-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD386627
Clinical trialSAP30L-AS1
Miscellaneous
canSAR (ICR)SAP30L-AS1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSAP30L-AS1
EVEXSAP30L-AS1
GoPubMedSAP30L-AS1
iHOPSAP30L-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:12:58 CET 2017

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