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SASS6 (SAS-6 centriolar assembly protein)

Identity

Alias_namesspindle assembly 6 homolog (C. elegans)
Alias_symbol (synonym)DKFZp761A078
SAS-6
FLJ22097
SAS6
Other aliasMCPH14
HGNC (Hugo) SASS6
LocusID (NCBI) 163786
Atlas_Id 55711
Location 1p21.2  [Link to chromosome band 1p21]
Location_base_pair Starts at 100083546 and ends at 100133095 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
SASS6 (1p21.2) / SASS6 (1p21.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SASS6   25403
Cards
Entrez_Gene (NCBI)SASS6  163786  SAS-6 centriolar assembly protein
AliasesMCPH14; SAS-6; SAS6
GeneCards (Weizmann)SASS6
Ensembl hg19 (Hinxton)ENSG00000156876 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000156876 [Gene_View]  chr1:100083546-100133095 [Contig_View]  SASS6 [Vega]
ICGC DataPortalENSG00000156876
TCGA cBioPortalSASS6
AceView (NCBI)SASS6
Genatlas (Paris)SASS6
WikiGenes163786
SOURCE (Princeton)SASS6
Genetics Home Reference (NIH)SASS6
Genomic and cartography
GoldenPath hg38 (UCSC)SASS6  -     chr1:100083546-100133095 -  1p21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SASS6  -     1p21.2   [Description]    (hg19-Feb_2009)
EnsemblSASS6 - 1p21.2 [CytoView hg19]  SASS6 - 1p21.2 [CytoView hg38]
Mapping of homologs : NCBISASS6 [Mapview hg19]  SASS6 [Mapview hg38]
OMIM609321   616402   
Gene and transcription
Genbank (Entrez)AK025750 AK302513 AK307824 AL834265 AY359522
RefSeq transcript (Entrez)NM_001304829 NM_194292
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SASS6
Cluster EST : UnigeneHs.591447 [ NCBI ]
CGAP (NCI)Hs.591447
Alternative Splicing GalleryENSG00000156876
Gene ExpressionSASS6 [ NCBI-GEO ]   SASS6 [ EBI - ARRAY_EXPRESS ]   SASS6 [ SEEK ]   SASS6 [ MEM ]
Gene Expression Viewer (FireBrowse)SASS6 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)163786
GTEX Portal (Tissue expression)SASS6
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UVJ0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UVJ0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UVJ0
Splice isoforms : SwissVarQ6UVJ0
PhosPhoSitePlusQ6UVJ0
Domains : Interpro (EBI)SAS-6    SAS-6_N   
Domain families : Pfam (Sanger)SAS-6_N (PF16531)   
Domain families : Pfam (NCBI)pfam16531   
Conserved Domain (NCBI)SASS6
DMDM Disease mutations163786
Blocks (Seattle)SASS6
SuperfamilyQ6UVJ0
Human Protein AtlasENSG00000156876
Peptide AtlasQ6UVJ0
HPRD10907
IPIIPI00375578   IPI01015609   IPI01015194   
Protein Interaction databases
DIP (DOE-UCLA)Q6UVJ0
IntAct (EBI)Q6UVJ0
FunCoupENSG00000156876
BioGRIDSASS6
STRING (EMBL)SASS6
ZODIACSASS6
Ontologies - Pathways
QuickGOQ6UVJ0
Ontology : AmiGOprotein binding  centrosome  centrosome  centriole  microtubule organizing center  cytosol  centriole replication  centrosome duplication  deuterosome  
Ontology : EGO-EBIprotein binding  centrosome  centrosome  centriole  microtubule organizing center  cytosol  centriole replication  centrosome duplication  deuterosome  
NDEx NetworkSASS6
Atlas of Cancer Signalling NetworkSASS6
Wikipedia pathwaysSASS6
Orthology - Evolution
OrthoDB163786
GeneTree (enSembl)ENSG00000156876
Phylogenetic Trees/Animal Genes : TreeFamSASS6
HOVERGENQ6UVJ0
HOGENOMQ6UVJ0
Homologs : HomoloGeneSASS6
Homology/Alignments : Family Browser (UCSC)SASS6
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSASS6 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SASS6
dbVarSASS6
ClinVarSASS6
1000_GenomesSASS6 
Exome Variant ServerSASS6
ExAC (Exome Aggregation Consortium)SASS6 (select the gene name)
Genetic variants : HAPMAP163786
Genomic Variants (DGV)SASS6 [DGVbeta]
DECIPHERSASS6 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisSASS6 
Mutations
ICGC Data PortalSASS6 
TCGA Data PortalSASS6 
Broad Tumor PortalSASS6
OASIS PortalSASS6 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSASS6  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDSASS6
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch SASS6
DgiDB (Drug Gene Interaction Database)SASS6
DoCM (Curated mutations)SASS6 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SASS6 (select a term)
intoGenSASS6
Cancer3DSASS6(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609321    616402   
Orphanet732   
MedgenSASS6
Genetic Testing Registry SASS6
NextProtQ6UVJ0 [Medical]
TSGene163786
GENETestsSASS6
Target ValidationSASS6
Huge Navigator SASS6 [HugePedia]
snp3D : Map Gene to Disease163786
BioCentury BCIQSASS6
ClinGenSASS6
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD163786
Chemical/Pharm GKB GenePA142670950
Clinical trialSASS6
Miscellaneous
canSAR (ICR)SASS6 (select the gene name)
Probes
Litterature
PubMed30 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSASS6
EVEXSASS6
GoPubMedSASS6
iHOPSASS6
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 14:06:35 CEST 2017

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