Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

SAT2 (spermidine/spermine N1-acetyltransferase family member 2)

Identity

Alias_namesspermidine/spermine N1-acetyltransferase 2
Alias_symbol (synonym)SSAT2
Other alias
HGNC (Hugo) SAT2
LocusID (NCBI) 112483
Atlas_Id 47569
Location 17p13.1  [Link to chromosome band 17p13]
Location_base_pair Starts at 7529556 and ends at 7531194 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SAT2   23160
Cards
Entrez_Gene (NCBI)SAT2  112483  spermidine/spermine N1-acetyltransferase family member 2
AliasesSSAT2
GeneCards (Weizmann)SAT2
Ensembl hg19 (Hinxton)ENSG00000141504 [Gene_View]  chr17:7529556-7531194 [Contig_View]  SAT2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000141504 [Gene_View]  chr17:7529556-7531194 [Contig_View]  SAT2 [Vega]
ICGC DataPortalENSG00000141504
TCGA cBioPortalSAT2
AceView (NCBI)SAT2
Genatlas (Paris)SAT2
WikiGenes112483
SOURCE (Princeton)SAT2
Genetics Home Reference (NIH)SAT2
Genomic and cartography
GoldenPath hg19 (UCSC)SAT2  -     chr17:7529556-7531194 -  17p13.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SAT2  -     17p13.1   [Description]    (hg38-Dec_2013)
EnsemblSAT2 - 17p13.1 [CytoView hg19]  SAT2 - 17p13.1 [CytoView hg38]
Mapping of homologs : NCBISAT2 [Mapview hg19]  SAT2 [Mapview hg38]
OMIM611463   
Gene and transcription
Genbank (Entrez)AF348524 BC011751 BC065922 BC095466 BG748008
RefSeq transcript (Entrez)NM_001320845 NM_001320846 NM_001320847 NM_133491
RefSeq genomic (Entrez)NC_000017 NC_018928 NG_011981 NT_010718 NW_004929405
Consensus coding sequences : CCDS (NCBI)SAT2
Cluster EST : UnigeneHs.10846 [ NCBI ]
CGAP (NCI)Hs.10846
Alternative Splicing GalleryENSG00000141504
Gene ExpressionSAT2 [ NCBI-GEO ]   SAT2 [ EBI - ARRAY_EXPRESS ]   SAT2 [ SEEK ]   SAT2 [ MEM ]
Gene Expression Viewer (FireBrowse)SAT2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)112483
GTEX Portal (Tissue expression)SAT2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96F10   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96F10  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96F10
Splice isoforms : SwissVarQ96F10
Catalytic activity : Enzyme2.3.1.57 [ Enzyme-Expasy ]   2.3.1.572.3.1.57 [ IntEnz-EBI ]   2.3.1.57 [ BRENDA ]   2.3.1.57 [ KEGG ]   
PhosPhoSitePlusQ96F10
Domaine pattern : Prosite (Expaxy)GNAT (PS51186)   
Domains : Interpro (EBI)Acyl_CoA_acyltransferase    GNAT_dom    SAT2   
Domain families : Pfam (Sanger)Acetyltransf_1 (PF00583)   
Domain families : Pfam (NCBI)pfam00583   
Conserved Domain (NCBI)SAT2
DMDM Disease mutations112483
Blocks (Seattle)SAT2
PDB (SRS)2BEI    2Q4V   
PDB (PDBSum)2BEI    2Q4V   
PDB (IMB)2BEI    2Q4V   
PDB (RSDB)2BEI    2Q4V   
Structural Biology KnowledgeBase2BEI    2Q4V   
SCOP (Structural Classification of Proteins)2BEI    2Q4V   
CATH (Classification of proteins structures)2BEI    2Q4V   
SuperfamilyQ96F10
Human Protein AtlasENSG00000141504
Peptide AtlasQ96F10
HPRD15296
IPIIPI00744810   
Protein Interaction databases
DIP (DOE-UCLA)Q96F10
IntAct (EBI)Q96F10
FunCoupENSG00000141504
BioGRIDSAT2
STRING (EMBL)SAT2
ZODIACSAT2
Ontologies - Pathways
QuickGOQ96F10
Ontology : AmiGOdiamine N-acetyltransferase activity  cytoplasm  putrescine catabolic process  spermidine acetylation  spermine acetylation  putrescine acetylation  nor-spermidine metabolic process  extracellular exosome  
Ontology : EGO-EBIdiamine N-acetyltransferase activity  cytoplasm  putrescine catabolic process  spermidine acetylation  spermine acetylation  putrescine acetylation  nor-spermidine metabolic process  extracellular exosome  
Pathways : KEGGArginine and proline metabolism   
NDEx NetworkSAT2
Atlas of Cancer Signalling NetworkSAT2
Wikipedia pathwaysSAT2
Orthology - Evolution
OrthoDB112483
GeneTree (enSembl)ENSG00000141504
Phylogenetic Trees/Animal Genes : TreeFamSAT2
HOVERGENQ96F10
HOGENOMQ96F10
Homologs : HomoloGeneSAT2
Homology/Alignments : Family Browser (UCSC)SAT2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerSAT2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)SAT2
dbVarSAT2
ClinVarSAT2
1000_GenomesSAT2 
Exome Variant ServerSAT2
ExAC (Exome Aggregation Consortium)SAT2 (select the gene name)
Genetic variants : HAPMAP112483
Genomic Variants (DGV)SAT2 [DGVbeta]
DECIPHER (Syndromes)17:7529556-7531194  ENSG00000141504
CONAN: Copy Number AnalysisSAT2 
Mutations
ICGC Data PortalSAT2 
TCGA Data PortalSAT2 
Broad Tumor PortalSAT2
OASIS PortalSAT2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICSAT2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDSAT2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch SAT2
DgiDB (Drug Gene Interaction Database)SAT2
DoCM (Curated mutations)SAT2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)SAT2 (select a term)
intoGenSAT2
Cancer3DSAT2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611463   
Orphanet
MedgenSAT2
Genetic Testing Registry SAT2
NextProtQ96F10 [Medical]
TSGene112483
GENETestsSAT2
Huge Navigator SAT2 [HugePedia]
snp3D : Map Gene to Disease112483
BioCentury BCIQSAT2
ClinGenSAT2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD112483
Chemical/Pharm GKB GenePA134979941
Clinical trialSAT2
Miscellaneous
canSAR (ICR)SAT2 (select the gene name)
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSAT2
EVEXSAT2
GoPubMedSAT2
iHOPSAT2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Mar 30 15:18:22 CEST 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.