SBDS (Shwachman-Bodian-Diamond syndrome)

Identity

Other names	CGI-97
	FLJ10917
	SDS
	SWDS
HGNC	SBDS
Location	7q11.22
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	SBDS   19440
Entrez_Gene	SBDS  51119  Shwachman-Bodian-Diamond syndrome
	Cards
GeneCards	SBDS
Ensembl	SBDS [Search_View]   ENSG00000126524 [Gene_View]
Genatlas	SBDS
GeneLynx	SBDS
eGenome	SBDS
euGene	51119
	Genomic and cartography
GoldenPath	SBDS  -  7q11.22   chr7:66090125-66098023 -  7q11.21   [Description]    (hg18-March_2006)
Ensembl	SBDS - 7q11.21 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	SBDS
	Gene and transcription
Genbank	AF151855 [ ENTREZ ]
Genbank	AK001779 [ ENTREZ ]
Genbank	AK289609 [ ENTREZ ]
Genbank	AY169963 [ ENTREZ ]
Genbank	BC065700 [ ENTREZ ]
RefSeq	NM_016038 [ SRS ]    NM_016038 [ ENTREZ ]
RefSeq	AC_000050 [ SRS ]    AC_000050 [ ENTREZ ]
RefSeq	AC_000068 [ SRS ]    AC_000068 [ ENTREZ ]
RefSeq	AC_000139 [ SRS ]    AC_000139 [ ENTREZ ]
RefSeq	NC_000007 [ SRS ]    NC_000007 [ ENTREZ ]
RefSeq	NG_007277 [ SRS ]    NG_007277 [ ENTREZ ]
RefSeq	NT_007758 [ SRS ]    NT_007758 [ ENTREZ ]
RefSeq	NT_079593 [ SRS ]    NT_079593 [ ENTREZ ]
RefSeq	NW_001839038 [ SRS ]    NW_001839038 [ ENTREZ ]
RefSeq	NW_923417 [ SRS ]    NW_923417 [ ENTREZ ]
AceView	SBDS AceView - NCBI
Unigene	Hs.110445 [ SRS ]    Hs.110445 [ NCBI ]     HS110445 [ spliceNest ]
Fast-db	5907 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q9Y3A5 [ SRS]    Q9Y3A5 [ EXPASY ]     Q9Y3A5 [ INTERPRO ]     Q9Y3A5 [ UNIPROT ]
Prosite	PS01267 UPF0023 [ SRS ]    PS01267 UPF0023 [ Expasy ]
Interpro	IPR002140 SBDS_related [ SRS ]    IPR002140 SBDS_related [ EBI ]
CluSTr	Q9Y3A5
Pfam	PF01172 SBDS [ SRS ]    PF01172 SBDS [ Sanger ]    pfam01172 [ NCBI-CDD ]
Prodom	PD009796 UPF0023[INRA-Toulouse]
Prodom	Q9Y3A5 SBDS_HUMAN [ Domain structure ]   Q9Y3A5 SBDS_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	Q9Y3A5
HPRD	07393
	Protein Interaction databases
DIP	Q9Y3A5
IntAct	Q9Y3A5
	Polymorphism : SNP, mutations, diseases
OMIM	260400;607444    [ map ]
GENECLINICS	260400;607444
SNP	SBDS [dbSNP-NCBI]
SNP	NM_016038 [SNP-NCI]
SNP	SBDS [GeneSNPs - Utah]  SBDS] [HGBASE - SRS]
HAPMAP	SBDS [HAPMAP]
HGMD	SBDS
	General knowledge
Family Browser	SBDS [UCSC Family Browser]
SOURCE	NM_016038
SMD	Hs.110445
SAGE	Hs.110445
GO	spindle pole [Amigo]  spindle pole
GO	inner cell mass cell proliferation [Amigo]  inner cell mass cell proliferation
GO	protein binding [Amigo]  protein binding
GO	nucleus [Amigo]  nucleus
GO	nucleolus [Amigo]  nucleolus
GO	cytoplasm [Amigo]  cytoplasm
GO	rRNA processing [Amigo]  rRNA processing
GO	learning [Amigo]  learning
GO	microtubule binding [Amigo]  microtubule binding
GO	rRNA binding [Amigo]  rRNA binding
GO	bone mineralization [Amigo]  bone mineralization
GO	leukocyte chemotaxis [Amigo]  leukocyte chemotaxis
GO	mitotic spindle stabilization [Amigo]  mitotic spindle stabilization
GO	bone marrow development [Amigo]  bone marrow development
PubGene	SBDS
TreeFam	SBDS
CTD	51119 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	SBDS Related clones (RZPD - Berlin)
	PubMed
PubMed	28 Pubmed reference(s) in LocusLink

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Aug 11 20:30:51 2008