Atlas of Genetics and Cytogenetics in Oncology and Haematology


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SBF1P1 (SET binding factor 1 pseudogene 1)

Identity

Other alias-
HGNC (Hugo) SBF1P1
LocusID (NCBI) 100133234
Atlas_Id 72989
Location 8q12.1  [Link to chromosome band 8q12]
Location_base_pair Starts at 56361757 and ends at 56367881 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SBF1P1   31098
Cards
Entrez_Gene (NCBI)SBF1P1  100133234  SET binding factor 1 pseudogene 1
Aliases
GeneCards (Weizmann)SBF1P1
Ensembl hg19 (Hinxton)ENSG00000248522 [Gene_View]  chr8:56361757-56367881 [Contig_View]  SBF1P1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000248522 [Gene_View]  chr8:56361757-56367881 [Contig_View]  SBF1P1 [Vega]
ICGC DataPortalENSG00000248522
TCGA cBioPortalSBF1P1
AceView (NCBI)SBF1P1
Genatlas (Paris)SBF1P1
WikiGenes100133234
SOURCE (Princeton)SBF1P1
Genetics Home Reference (NIH)SBF1P1
Genomic and cartography
GoldenPath hg19 (UCSC)SBF1P1  -     chr8:56361757-56367881 -  8q12.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SBF1P1  -     8q12.1   [Description]    (hg38-Dec_2013)
EnsemblSBF1P1 - 8q12.1 [CytoView hg19]  SBF1P1 - 8q12.1 [CytoView hg38]
Mapping of homologs : NCBISBF1P1 [Mapview hg19]  SBF1P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AW297679
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_008183 NW_004929339
Consensus coding sequences : CCDS (NCBI)SBF1P1
Cluster EST : UnigeneHs.729852 [ NCBI ]
CGAP (NCI)Hs.729852
Alternative Splicing GalleryENSG00000248522
Gene ExpressionSBF1P1 [ NCBI-GEO ]   SBF1P1 [ EBI - ARRAY_EXPRESS ]   SBF1P1 [ SEEK ]   SBF1P1 [ MEM ]
Gene Expression Viewer (FireBrowse)SBF1P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100133234
GTEX Portal (Tissue expression)SBF1P1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SBF1P1
DMDM Disease mutations100133234
Blocks (Seattle)SBF1P1
Human Protein AtlasENSG00000248522
Protein Interaction databases
FunCoupENSG00000248522
BioGRIDSBF1P1
STRING (EMBL)SBF1P1
ZODIACSBF1P1
Ontologies - Pathways
Huge Navigator SBF1P1 [HugePedia]
snp3D : Map Gene to Disease100133234
BioCentury BCIQSBF1P1
ClinGenSBF1P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100133234
Chemical/Pharm GKB GenePA142670951
Clinical trialSBF1P1
Miscellaneous
canSAR (ICR)SBF1P1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSBF1P1
EVEXSBF1P1
GoPubMedSBF1P1
iHOPSBF1P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:42:20 CET 2017

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