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SCAMP1-AS1 (SCAMP1 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) SCAMP1-AS1
LocusID (NCBI) 728769
Atlas_Id 72997
Location 5q14.1  [Link to chromosome band 5q14]
Location_base_pair Starts at 77654588 and ends at 77656365 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SCAMP1-AS1   50544
Cards
Entrez_Gene (NCBI)SCAMP1-AS1  728769  SCAMP1 antisense RNA 1
Aliases
GeneCards (Weizmann)SCAMP1-AS1
Ensembl hg19 (Hinxton)ENSG00000245556 [Gene_View]  chr5:77654588-77656365 [Contig_View]  SCAMP1-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000245556 [Gene_View]  chr5:77654588-77656365 [Contig_View]  SCAMP1-AS1 [Vega]
ICGC DataPortalENSG00000245556
TCGA cBioPortalSCAMP1-AS1
AceView (NCBI)SCAMP1-AS1
Genatlas (Paris)SCAMP1-AS1
WikiGenes728769
SOURCE (Princeton)SCAMP1-AS1
Genetics Home Reference (NIH)SCAMP1-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)SCAMP1-AS1  -     chr5:77654588-77656365 -  5q14.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SCAMP1-AS1  -     5q14.1   [Description]    (hg38-Dec_2013)
EnsemblSCAMP1-AS1 - 5q14.1 [CytoView hg19]  SCAMP1-AS1 - 5q14.1 [CytoView hg38]
Mapping of homologs : NCBISCAMP1-AS1 [Mapview hg19]  SCAMP1-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF086472 AK129849 BC039455 HG498117 HG498118
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_034772 NW_004929322
Consensus coding sequences : CCDS (NCBI)SCAMP1-AS1
Cluster EST : UnigeneHs.586193 [ NCBI ]
CGAP (NCI)Hs.586193
Alternative Splicing GalleryENSG00000245556
Gene ExpressionSCAMP1-AS1 [ NCBI-GEO ]   SCAMP1-AS1 [ EBI - ARRAY_EXPRESS ]   SCAMP1-AS1 [ SEEK ]   SCAMP1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)SCAMP1-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)728769
GTEX Portal (Tissue expression)SCAMP1-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SCAMP1-AS1
DMDM Disease mutations728769
Blocks (Seattle)SCAMP1-AS1
Human Protein AtlasENSG00000245556
Protein Interaction databases
FunCoupENSG00000245556
BioGRIDSCAMP1-AS1
STRING (EMBL)SCAMP1-AS1
ZODIACSCAMP1-AS1
Ontologies - Pathways
Huge Navigator SCAMP1-AS1 [HugePedia]
snp3D : Map Gene to Disease728769
BioCentury BCIQSCAMP1-AS1
ClinGenSCAMP1-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD728769
Clinical trialSCAMP1-AS1
Miscellaneous
canSAR (ICR)SCAMP1-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSCAMP1-AS1
EVEXSCAMP1-AS1
GoPubMedSCAMP1-AS1
iHOPSCAMP1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:42:21 CET 2017

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