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SCARNA10 (small Cajal body-specific RNA 10)

Identity

Alias_symbol (synonym)U85
Other alias
HGNC (Hugo) SCARNA10
LocusID (NCBI) 692148
Atlas_Id 73006
Location 12p13.31  [Link to chromosome band 12p13]
Location_base_pair Starts at 6510222 and ends at 6510551 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SCARNA10   32567
Cards
Entrez_Gene (NCBI)SCARNA10  692148  small Cajal body-specific RNA 10
AliasesU85
GeneCards (Weizmann)SCARNA10
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr12:6510222-6510551 [Contig_View]  SCARNA10 [Vega]
TCGA cBioPortalSCARNA10
AceView (NCBI)SCARNA10
Genatlas (Paris)SCARNA10
WikiGenes692148
SOURCE (Princeton)SCARNA10
Genetics Home Reference (NIH)SCARNA10
Genomic and cartography
GoldenPath hg38 (UCSC)SCARNA10  -     chr12:6510222-6510551 +  12p13.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SCARNA10  -     12p13.31   [Description]    (hg19-Feb_2009)
EnsemblSCARNA10 - 12p13.31 [CytoView hg19]  SCARNA10 - 12p13.31 [CytoView hg38]
Mapping of homologs : NCBISCARNA10 [Mapview hg19]  SCARNA10 [Mapview hg38]
OMIM615639   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SCARNA10
Gene ExpressionSCARNA10 [ NCBI-GEO ]   SCARNA10 [ EBI - ARRAY_EXPRESS ]   SCARNA10 [ SEEK ]   SCARNA10 [ MEM ]
Gene Expression Viewer (FireBrowse)SCARNA10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)692148
GTEX Portal (Tissue expression)SCARNA10
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SCARNA10
DMDM Disease mutations692148
Blocks (Seattle)SCARNA10
Protein Interaction databases
BioGRIDSCARNA10
STRING (EMBL)SCARNA10
ZODIACSCARNA10
Ontologies - Pathways
Huge Navigator SCARNA10 [HugePedia]
snp3D : Map Gene to Disease692148
BioCentury BCIQSCARNA10
ClinGenSCARNA10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD692148
Chemical/Pharm GKB GenePA144596370
Clinical trialSCARNA10
Miscellaneous
canSAR (ICR)SCARNA10 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSCARNA10
EVEXSCARNA10
GoPubMedSCARNA10
iHOPSCARNA10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 11:52:16 CEST 2017

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