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SCARNA15 (small Cajal body-specific RNA 15)

Identity

Alias_symbol (synonym)ACA45
Other alias
HGNC (Hugo) SCARNA15
LocusID (NCBI) 677778
Atlas_Id 73011
Location 15q25.2  [Link to chromosome band 15q25]
Location_base_pair Starts at 82755945 and ends at 82756071 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SCARNA15   32572
Cards
Entrez_Gene (NCBI)SCARNA15  677778  small Cajal body-specific RNA 15
AliasesACA45
GeneCards (Weizmann)SCARNA15
Ensembl hg19 (Hinxton)ENSG00000277864 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000277864 [Gene_View]  chr15:82755945-82756071 [Contig_View]  SCARNA15 [Vega]
ICGC DataPortalENSG00000277864
TCGA cBioPortalSCARNA15
AceView (NCBI)SCARNA15
Genatlas (Paris)SCARNA15
WikiGenes677778
SOURCE (Princeton)SCARNA15
Genetics Home Reference (NIH)SCARNA15
Genomic and cartography
GoldenPath hg38 (UCSC)SCARNA15  -     chr15:82755945-82756071 +  15q25.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SCARNA15  -     15q25.2   [Description]    (hg19-Feb_2009)
EnsemblSCARNA15 - 15q25.2 [CytoView hg19]  SCARNA15 - 15q25.2 [CytoView hg38]
Mapping of homologs : NCBISCARNA15 [Mapview hg19]  SCARNA15 [Mapview hg38]
OMIM612675   
Gene and transcription
Genbank (Entrez)AJ609485
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SCARNA15
Cluster EST : UnigeneHs.743895 [ NCBI ]
CGAP (NCI)Hs.743895
Alternative Splicing GalleryENSG00000277864
Gene ExpressionSCARNA15 [ NCBI-GEO ]   SCARNA15 [ EBI - ARRAY_EXPRESS ]   SCARNA15 [ SEEK ]   SCARNA15 [ MEM ]
Gene Expression Viewer (FireBrowse)SCARNA15 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)677778
GTEX Portal (Tissue expression)SCARNA15
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SCARNA15
DMDM Disease mutations677778
Blocks (Seattle)SCARNA15
Human Protein AtlasENSG00000277864
Protein Interaction databases
FunCoupENSG00000277864
BioGRIDSCARNA15
STRING (EMBL)SCARNA15
ZODIACSCARNA15
Ontologies - Pathways
Huge Navigator SCARNA15 [HugePedia]
snp3D : Map Gene to Disease677778
BioCentury BCIQSCARNA15
ClinGenSCARNA15
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD677778
Chemical/Pharm GKB GenePA144596375
Clinical trialSCARNA15
Miscellaneous
canSAR (ICR)SCARNA15 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSCARNA15
EVEXSCARNA15
GoPubMedSCARNA15
iHOPSCARNA15
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:37:15 CEST 2017

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