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SCARNA20 (small Cajal body-specific RNA 20)

Identity

Alias_symbol (synonym)ACA66
Other alias
HGNC (Hugo) SCARNA20
LocusID (NCBI) 677681
Atlas_Id 73016
Location 17q23.2  [Link to chromosome band 17q23]
Location_base_pair Starts at 58308877 and ends at 58309006 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SCARNA20   32578
Cards
Entrez_Gene (NCBI)SCARNA20  677681  small Cajal body-specific RNA 20
AliasesACA66
GeneCards (Weizmann)SCARNA20
Ensembl hg19 (Hinxton) [Gene_View]  chr17:58308877-58309006 [Contig_View]  SCARNA20 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:58308877-58309006 [Contig_View]  SCARNA20 [Vega]
TCGA cBioPortalSCARNA20
AceView (NCBI)SCARNA20
Genatlas (Paris)SCARNA20
WikiGenes677681
SOURCE (Princeton)SCARNA20
Genetics Home Reference (NIH)SCARNA20
Genomic and cartography
GoldenPath hg19 (UCSC)SCARNA20  -     chr17:58308877-58309006 -  17q23.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)SCARNA20  -     17q23.2   [Description]    (hg38-Dec_2013)
EnsemblSCARNA20 - 17q23.2 [CytoView hg19]  SCARNA20 - 17q23.2 [CytoView hg38]
Mapping of homologs : NCBISCARNA20 [Mapview hg19]  SCARNA20 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010783 NW_004929407
Consensus coding sequences : CCDS (NCBI)SCARNA20
Gene ExpressionSCARNA20 [ NCBI-GEO ]   SCARNA20 [ EBI - ARRAY_EXPRESS ]   SCARNA20 [ SEEK ]   SCARNA20 [ MEM ]
Gene Expression Viewer (FireBrowse)SCARNA20 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)677681
GTEX Portal (Tissue expression)SCARNA20
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SCARNA20
DMDM Disease mutations677681
Blocks (Seattle)SCARNA20
Protein Interaction databases
BioGRIDSCARNA20
STRING (EMBL)SCARNA20
ZODIACSCARNA20
Ontologies - Pathways
Huge Navigator SCARNA20 [HugePedia]
snp3D : Map Gene to Disease677681
BioCentury BCIQSCARNA20
ClinGenSCARNA20
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD677681
Chemical/Pharm GKB GenePA144596379
Clinical trialSCARNA20
Miscellaneous
canSAR (ICR)SCARNA20 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSCARNA20
EVEXSCARNA20
GoPubMedSCARNA20
iHOPSCARNA20
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:42:26 CET 2017

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