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SCARNA21 (small Cajal body-specific RNA 21)

Identity

Alias_symbol (synonym)ACA68
SCARNA21A
Other alias
HGNC (Hugo) SCARNA21
LocusID (NCBI) 677763
Atlas_Id 73017
Location 17p13.1  [Link to chromosome band 17p13]
Location_base_pair Starts at 7906123 and ends at 7906260 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)SCARNA21   32579
Cards
Entrez_Gene (NCBI)SCARNA21  677763  small Cajal body-specific RNA 21
AliasesACA68; SCARNA21A
GeneCards (Weizmann)SCARNA21
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:7906123-7906260 [Contig_View]  SCARNA21 [Vega]
TCGA cBioPortalSCARNA21
AceView (NCBI)SCARNA21
Genatlas (Paris)SCARNA21
WikiGenes677763
SOURCE (Princeton)SCARNA21
Genetics Home Reference (NIH)SCARNA21
Genomic and cartography
GoldenPath hg38 (UCSC)SCARNA21  -     chr17:7906123-7906260 +  17p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)SCARNA21  -     17p13.1   [Description]    (hg19-Feb_2009)
EnsemblSCARNA21 - 17p13.1 [CytoView hg19]  SCARNA21 - 17p13.1 [CytoView hg38]
Mapping of homologs : NCBISCARNA21 [Mapview hg19]  SCARNA21 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)SCARNA21
Gene ExpressionSCARNA21 [ NCBI-GEO ]   SCARNA21 [ EBI - ARRAY_EXPRESS ]   SCARNA21 [ SEEK ]   SCARNA21 [ MEM ]
Gene Expression Viewer (FireBrowse)SCARNA21 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)677763
GTEX Portal (Tissue expression)SCARNA21
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)SCARNA21
DMDM Disease mutations677763
Blocks (Seattle)SCARNA21
Protein Interaction databases
BioGRIDSCARNA21
STRING (EMBL)SCARNA21
ZODIACSCARNA21
Ontologies - Pathways
Huge Navigator SCARNA21 [HugePedia]
snp3D : Map Gene to Disease677763
BioCentury BCIQSCARNA21
ClinGenSCARNA21
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD677763
Chemical/Pharm GKB GenePA144596380
Clinical trialSCARNA21
Miscellaneous
canSAR (ICR)SCARNA21 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineSCARNA21
EVEXSCARNA21
GoPubMedSCARNA21
iHOPSCARNA21
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:39:59 CEST 2017

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